RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ZMYND11Q15326 602 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 C2orf68Q2NKX9 166 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 GAB4Q2WGN9 574 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 DEFB134Q4QY38 66 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 PLPP4Q5VZY2 271 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 ZC3H14Q6PJT7 736 aaKnown RBP14.23□□□□□ -0.13
DDX55-201ENST00000238146 PAQR7Q86WK9 346 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 SHISA5Q8N114 240 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 BVESQ8NE79 360 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 DNAAF1Q8NEP3 725 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 OR5M1Q8NGP8 315 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 ZCCHC10Q8TBK6 192 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 RAB40AQ8WXH6 277 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 SIPA1Q96FS4 1042 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 TIMM29Q9BSF4 260 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 ARL6Q9H0F7 186 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 GLS2Q9UI32 602 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 ZNF281Q9Y2X9 895 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 SCN2AQ99250 2005 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 A0A087WV48 116 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 GXYLT2A0PJZ3 443 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 IMPA2O14732 288 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 SCAMP1O15126 338 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 ZFPL1O95159 310 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 PAK4O96013 591 aaPredicted RBP14.23□□□□□ -0.13
DDX55-201ENST00000238146 LINC00271P0C7V0 271 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 VIPR2P41587 438 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 DLX5P56178 289 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 IRF4Q15306 451 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 SLAIN1Q8ND83 568 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 SUSD6Q92537 303 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 FKRPQ9H9S5 495 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 C14orf105Q9NVL8 296 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 ADAM18Q9Y3Q7 739 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 DENND4AQ7Z401 1863 aa14.23□□□□□ -0.13
DDX55-201ENST00000238146 MCIDASD6RGH6 385 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 PPP3CBP16298 524 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 TAS2R20P59543 309 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 NAXDQ8IW45 347 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 RPS4Y2Q8TD47 263 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 SEMA4CQ9C0C4 833 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 PRR19A6NJB7 356 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 BRINP1O60477 761 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 ART1P52961 327 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 SLC36A1Q7Z2H8 476 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 CDRT4Q8N9R6 151 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 OR1S1Q8NH92 325 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 RNF166Q96A37 237 aaPredicted RBP14.22□□□□□ -0.13
DDX55-201ENST00000238146 MIB2Q96AX9 1013 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 HSPA12BQ96MM6 686 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 GINS4Q9BRT9 223 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 TSPAN10Q9H1Z9 355 aaPredicted RBP14.22□□□□□ -0.13
DDX55-201ENST00000238146 CXXC1Q9P0U4 656 aaPredicted RBP14.22□□□□□ -0.13
DDX55-201ENST00000238146 FBXL2Q9UKC9 423 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 DAPP1Q9UN19 280 aa14.22□□□□□ -0.13
DDX55-201ENST00000238146 MUC22E2RYF6 1773 aaPredicted RBP14.22□□□□□ -0.13
DDX55-201ENST00000238146 FXYD6-FXYD2A0A087WZ82 144 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 LRRC72A6NJI9 287 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 PRR32B1ATL7 298 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 NDUFB2O95178 105 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 TMIGD3P0DMS9 266 aaPredicted RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 CALCBP10092 127 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 TPMTP51580 245 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 FGL2Q14314 439 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 GSG1LQ6UXU4 331 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 HSD17B13Q7Z5P4 300 aaPredicted RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 ZNF614Q8N883 585 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 OR4E2Q8NGC2 313 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 LRFN5Q96NI6 719 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 NMNAT3Q96T66 252 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 FXYD6Q9H0Q3 95 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 EXOSC3Q9NQT5 275 aaKnown RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 FBXL21Q9UKT6 434 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 CHURC1-FNTBB4DL54 471 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 LDB3O75112 727 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 CEACAM5P06731 702 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 AK4P27144 223 aaPredicted RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 TLX1P31314 330 aaPredicted RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 GABRA3P34903 492 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 MNDAP41218 407 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 MAZP56270 477 aaKnown RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 MAT1AQ00266 395 aaKnown RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 LGALS3BPQ08380 585 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 EXOSC7Q15024 291 aaKnown RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 ALG10BQ5I7T1 473 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 AGBL4Q5VU57 503 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 OR7E24Q6IFN5 339 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 STAC2Q6ZMT1 411 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 DNM1P46Q6ZS02 220 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 SLC43A2Q8N370 569 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 NPEPL1Q8NDH3 523 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 ZPLD1Q8TCW7 415 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 SERINC2Q96SA4 455 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 STACQ99469 402 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 TRPV4Q9HBA0 871 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 PHPT1Q9NRX4 125 aaPredicted RBP14.21□□□□□ -0.13
DDX55-201ENST00000238146 GPR160Q9UJ42 338 aa14.21□□□□□ -0.13
DDX55-201ENST00000238146 P2RX6O15547 441 aa14.2□□□□□ -0.14
DDX55-201ENST00000238146 TMEM127O75204 238 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms