RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 LYSMD1Q96S90 227 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 NMNAT2Q9BZQ4 307 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 CALHM2Q9HA72 323 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 PPP1R3DO95685 299 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 ARSAP15289 507 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 CADM4Q8NFZ8 388 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 OR4K13Q8NH42 304 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 A0A0A6YYC8 382 aaPredicted RBP6.91□□□□□ -1.3
MED28-201ENST00000237380 I3L1I5 382 aaPredicted RBP6.91□□□□□ -1.3
MED28-201ENST00000237380 CACNG3O60359 315 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 HLA-DOBP13765 273 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 ZNF529Q6P280 563 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 ZNF516Q92618 1163 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 ST6GALNAC5Q9BVH7 336 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 GLRX2Q9NS18 164 aa6.91□□□□□ -1.3
MED28-201ENST00000237380 A0A0A6YYH2 397 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 A6NJ64 397 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 DVL1O14640 695 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 DVL1P1P54792 670 aaPredicted RBP6.9□□□□□ -1.3
MED28-201ENST00000237380 FAM78AQ5JUQ0 283 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 TSSK4Q6SA08 328 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 C6orf89Q6UWU4 347 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 ASRGL1Q7L266 308 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 C3orf58Q8NDZ4 430 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 OR10J5Q8NHC4 309 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 ST8SIA2Q92186 375 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 ISOC1Q96CN7 298 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 SLC6A17Q9H1V8 727 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 ZNF334Q9HCZ1 680 aaPredicted RBP6.9□□□□□ -1.3
MED28-201ENST00000237380 MYOZ1Q9NP98 299 aaPredicted RBP6.9□□□□□ -1.3
MED28-201ENST00000237380 FGF21Q9NSA1 209 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 INTS6Q9UL03 887 aaKnown RBP6.9□□□□□ -1.3
MED28-201ENST00000237380 TIAM2Q8IVF5 1701 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 METTL15A6NJ78 407 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 DNASE1P24855 282 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 ADPRHP54922 357 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 MFAP5Q13361 173 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 TAF9Q16594 264 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 THEM4Q5T1C6 240 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 UBE2UQ5VVX9 321 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 GRINAQ7Z429 371 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 CPEB2Q7Z5Q1 589 aaKnown RBP6.9□□□□□ -1.3
MED28-201ENST00000237380 RPS19BP1Q86WX3 136 aaKnown RBP6.9□□□□□ -1.3
MED28-201ENST00000237380 HS3ST2Q9Y278 367 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 CXorf51AA0A1B0GTR3 108 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 ANTXRLA6NF34 631 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 CTNSO60931 367 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 RAB3DO95716 219 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 MYF6P23409 242 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 CERS1P27544 350 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 ALDH3B1P43353 468 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 RNLSQ5VYX0 342 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.9□□□□□ -1.3
MED28-201ENST00000237380 DUSP13Q9UII6 198 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 LRRC3CA6NJW4 275 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 ZNF705EA8MWA4 302 aaPredicted RBP6.9□□□□□ -1.3
MED28-201ENST00000237380 INMT-MINDY4F8WBC2 141 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 CHEK1O14757 476 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 GDF10P55107 478 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 SELENBP1Q13228 472 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 FAM198BQ6UWH4 519 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 SLC30A3Q99726 388 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 FAM234AQ9H0X4 552 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 NECAP2Q9NVZ3 263 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 SLCO1C1Q9NYB5 712 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 CHRNA9Q9UGM1 479 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 C4AP0C0L4 1744 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 PLCH1Q4KWH8 1693 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 PEX2P28328 305 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 PXNP49023 591 aaPredicted RBP6.9□□□□□ -1.3
MED28-201ENST00000237380 AQP6Q13520 282 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 LIPKQ5VXJ0 399 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 TMEM135Q86UB9 458 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 C1orf174Q8IYL3 243 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 BEST4Q8NFU0 473 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 C7orf43Q8WVR3 580 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 OR52A5Q9H2C5 316 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 WDR76Q9H967 626 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 KCNJ16Q9NPI9 418 aa6.9□□□□□ -1.3
MED28-201ENST00000237380 KLK10O43240 276 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 HOXC11O43248 304 aaPredicted RBP6.9□□□□□ -1.31
MED28-201ENST00000237380 DFFBO76075 338 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 STATHP02808 62 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 SLC35E2P0CK97 266 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 PTPN6P29350 595 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 CLDN17P56750 224 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 FOXC1Q12948 553 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 JMJD6Q6NYC1 403 aaPredicted RBP6.9□□□□□ -1.31
MED28-201ENST00000237380 LINC00696Q6ZRV3 163 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 OR4F15Q8NGB8 312 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 BSCL2Q96G97 398 aaPredicted RBP6.9□□□□□ -1.31
MED28-201ENST00000237380 BARD1Q99728 777 aaKnown RBP6.9□□□□□ -1.31
MED28-201ENST00000237380 SEMA4CQ9C0C4 833 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 TMEM269A0A1B0GVZ9 245 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 TRAF3IP2O43734 574 aaPredicted RBP6.9□□□□□ -1.31
MED28-201ENST00000237380 AADACP22760 399 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 ADRA1AP35348 466 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 SOX3P41225 446 aa6.9□□□□□ -1.31
MED28-201ENST00000237380 POU3F1Q03052 451 aaPredicted RBP6.9□□□□□ -1.31
MED28-201ENST00000237380 TMEM176BQ3YBM2 270 aaPredicted RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms