RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CH25HO95992 272 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 CD8BP10966 210 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 FAM27E3Q08E93 113 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 PDK3Q15120 406 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 MS4A18Q3C1V0 323 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 FAM69AQ5T7M9 428 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 ZNF787Q6DD87 383 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 TMEM225Q6GV28 225 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 DHFR2Q86XF0 187 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 MEX3DQ86XN8 651 aaKnown RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 C10orf53Q8N6V4 93 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 ACBD4Q8NC06 268 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 PFN4Q8NHR9 129 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 ZNF417Q8TAU3 575 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 PIGXQ8TBF5 258 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 RNASE6Q93091 150 aaKnown RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 ZNF587Q96SQ5 575 aaPredicted RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 FNDC11Q9BVV2 318 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 RBM24Q9BX46 236 aaKnown RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 POLR2J2Q9GZM3 115 aaKnown RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 ENKD1Q9H0I2 346 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 POLR2J3Q9H1A7 115 aaKnown RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 GP6Q9HCN6 339 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 GALNT8Q9NY28 637 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 FLNBO75369 2602 aaKnown RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 PIP5K1CO60331 668 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 DNAJC8O75937 253 aaPredicted RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 HPRP00739 348 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 IGFBP2P18065 325 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 SLC16A1P53985 500 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 ST3GAL3Q11203 375 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 EXOC3L2Q2M3D2 409 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 DNAL1Q4LDG9 190 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 LCN8Q6JVE9 175 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 TBPL2Q6SJ96 375 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 C5orf46Q6UWT4 87 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 OR9K2Q8NGE7 335 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 TMEM239Q8WW34 195 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 ZNF385AQ96PM9 386 aaKnown RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 SEPHS2Q99611 448 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 EPYCQ99645 322 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 NMNAT1Q9HAN9 279 aaPredicted RBP12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 C20orf141Q9NUB4 165 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 PRSS50Q9UI38 385 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 FLVCR1Q9Y5Y0 555 aa12.78□□□□□ -0.36
SUPT4H1-201ENST00000225504 THRBP10828 461 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 FUT1P19526 365 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 ZNF74Q16587 644 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 TFAP2EQ6VUC0 442 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 MEX3BQ6ZN04 569 aaKnown RBP12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 H1FNTQ75WM6 255 aaPredicted RBP12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 GALNT5Q7Z7M9 940 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 GPAT4Q86UL3 456 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 EPHX4Q8IUS5 362 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 OFCC1Q8IZS5 231 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 OR6S1Q8NH40 331 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 ASB9Q96DX5 294 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 B3GAT1Q9P2W7 334 aa12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 NOSIPQ9Y314 301 aaKnown RBP12.77□□□□□ -0.37
SUPT4H1-201ENST00000225504 CRYBG3Q68DQ2 2970 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 A0A087WUU8 490 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 IGHV3-9P01782 118 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 MT-ND1P03886 318 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 HLA-DOBP13765 273 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 RBM34P42696 430 aaKnown RBP12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 OR3A2P47893 321 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 PMS2P3Q13401 168 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 TRAM2Q15035 370 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 NHLRC1Q6VVB1 395 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 C22orf34Q6ZV56 151 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 CREB3L2Q70SY1 520 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 SLC46A3Q7Z3Q1 461 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 DMRTC2Q8IXT2 367 aaPredicted RBP12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 PIK3C3Q8NEB9 887 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 LINC01560Q8TB33 94 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 HS6ST2Q96MM7 605 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 SF3B5Q9BWJ5 86 aaKnown RBP12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 SLC19A3Q9BZV2 496 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 C6orf203Q9P0P8 240 aaPredicted RBP12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 RASD1Q9Y272 281 aa12.76□□□□□ -0.37
SUPT4H1-201ENST00000225504 ENO4A6NNW6 628 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 PLPP3O14495 311 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 GPR171O14626 319 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 ATP5HO75947 161 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 RHCEP18577 417 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 GTF2E2P29084 291 aaKnown RBP12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 CD79BP40259 229 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 TRAP1Q12931 704 aaKnown RBP12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 TSC22D1Q15714 1073 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 ANKRD34AQ69YU3 496 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 PODNL1Q6PEZ8 512 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 CYP4Z1Q86W10 505 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 WDFY1Q8IWB7 410 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 OXGR1Q96P68 337 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 PIP5K1AQ99755 562 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 SPOCK3Q9BQ16 436 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 TACO1Q9BSH4 297 aaKnown RBP12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 ASPNQ9BXN1 380 aa12.75□□□□□ -0.37
SUPT4H1-201ENST00000225504 MUC13Q9H3R2 512 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms