RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MTCP1P56278 107 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 GDF7Q7Z4P5 450 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 OR1S1Q8NH92 325 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 A0A1W2PR48 441 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 TCRBV3S1A0A5B6 114 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF814B7Z6K7 855 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 EIF1BO60739 113 aaKnown RBP17.05■□□□□ 0.32
CLIP2-201ENST00000223398 AGAP7PQ5VUJ5 663 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 ASB17Q8WXJ9 295 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 AGAP4Q96P64 663 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 SMOC1Q9H4F8 434 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 PLEKHA3Q9HB20 300 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 MFAP5Q13361 173 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 B3GNT8Q7Z7M8 397 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 BPHLQ86WA6 291 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-201ENST00000223398 OR6T1Q8NGN1 323 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 ARL6Q9H0F7 186 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 C4orf47A7E2U8 309 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF736B4DX44 427 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-201ENST00000223398 CDK1P06493 297 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 HLA-DMAP28067 261 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF616Q08AN1 781 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 OR8B8Q15620 311 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 TCEAL2Q9H3H9 227 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-201ENST00000223398 I3L521 148 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 CSO75390 466 aaKnown RBP17.05■□□□□ 0.32
CLIP2-201ENST00000223398 TRHRP34981 398 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-201ENST00000223398 PPP5CP53041 499 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 PGM2L1Q6PCE3 622 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 LRFN1Q9P244 771 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 SLC22A7Q9Y694 548 aa17.05■□□□□ 0.32
CLIP2-201ENST00000223398 PRRG2O14669 202 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 TSFMP43897 325 aaKnown RBP17.04■□□□□ 0.32
CLIP2-201ENST00000223398 CCBE1Q6UXH8 406 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-201ENST00000223398 CD163Q86VB7 1156 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 CDX2Q99626 313 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-201ENST00000223398 SIDT1Q9NXL6 827 aaKnown RBP17.04■□□□□ 0.32
CLIP2-201ENST00000223398 MLXQ9UH92 298 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 ACP2P11117 423 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 C1orf140Q5VVS0 124 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 BHLHE23Q8NDY6 225 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 H1FXQ92522 213 aaKnown RBP17.04■□□□□ 0.32
CLIP2-201ENST00000223398 APH1AQ96BI3 265 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 LYSMD1Q96S90 227 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 ACOD1A6NK06 481 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 IKZF1Q13422 519 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 PM20D2Q8IYS1 436 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 RASD2Q96D21 266 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 TEX37Q96LM6 180 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF780AO75290 641 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-201ENST00000223398 NFATC3Q12968 1075 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 SGPP2Q8IWX5 399 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 OR1J2Q8NGS2 313 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 HAVCR2Q8TDQ0 301 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 EMC6Q9BV81 110 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 RASD1Q9Y272 281 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 TP53TG5Q9Y2B4 290 aa17.04■□□□□ 0.32
CLIP2-201ENST00000223398 A8MVM7 634 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 CHRNB4P30926 498 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF91Q05481 1191 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 C5orf46Q6UWT4 87 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 DHRS13Q6UX07 377 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 OR2W5A6NFC9 320 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 SLC35F3Q8IY50 421 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 GGHQ92820 318 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 LRRC61Q9BV99 259 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 EIF5A2Q9GZV4 153 aaKnown RBP17.03■□□□□ 0.32
CLIP2-201ENST00000223398 CRHBPP24387 322 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 COL18A1P39060 1754 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 GAB1Q13480 694 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 C22orf15Q8WYQ4 148 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 MIB2Q96AX9 1013 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 TRIB1Q96RU8 372 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 VRK1Q99986 396 aaPredicted RBP17.03■□□□□ 0.32
CLIP2-201ENST00000223398 OR52A5Q9H2C5 316 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 TUBB1Q9H4B7 451 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 RANBP3Q9H6Z4 567 aaPredicted RBP17.03■□□□□ 0.32
CLIP2-201ENST00000223398 A4GALTQ9NPC4 353 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 ENSAO43768 121 aaKnown RBP17.03■□□□□ 0.32
CLIP2-201ENST00000223398 NCR1O76036 304 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 PPIAP62937 165 aaKnown RBP17.03■□□□□ 0.32
CLIP2-201ENST00000223398 CRMP1Q14194 572 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 PIWIL3Q7Z3Z3 882 aaKnown RBP17.03■□□□□ 0.32
CLIP2-201ENST00000223398 LILRA2Q8N149 483 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 ZNF511Q8NB15 262 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 LANCL2Q9NS86 450 aa17.03■□□□□ 0.32
CLIP2-201ENST00000223398 GPR171O14626 319 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 MBTPS2O43462 519 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 PRKAR1BP31321 381 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 PRICKLE2Q7Z3G6 844 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 CPEB2Q7Z5Q1 589 aaKnown RBP17.02■□□□□ 0.32
CLIP2-201ENST00000223398 PFN4Q8NHR9 129 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 MAELQ96JY0 434 aaKnown RBP17.02■□□□□ 0.32
CLIP2-201ENST00000223398 FAM117AQ9C073 453 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 METTL9Q9H1A3 318 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 FAM53CQ9NYF3 392 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 LUZP4Q9P127 313 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 LHX6Q9UPM6 363 aa17.02■□□□□ 0.32
CLIP2-201ENST00000223398 ARID1BQ8NFD5 2236 aaPredicted RBP17.02■□□□□ 0.32
CLIP2-201ENST00000223398 CCDC163A0A0D9SF12 145 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms