RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 EGFL7Q9UHF1 273 aa11.23□□□□□ -0.61
LSM5-201ENST00000223084 LRRN3E7EW58 273 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 M0R082 166 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 NDUFAB1O14561 156 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 GPR171O14626 319 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 CHP2O43745 196 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 MRPL33O75394 65 aaKnown RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 CTAG2O75638 210 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 ZNF682O95780 498 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 SERPINA1P01009 418 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 BGLAPP02818 100 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 TCN1P20061 433 aaPredicted RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 GTF2E2P29084 291 aaKnown RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 GRPRP30550 384 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 YAP1P46937 504 aaKnown RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 MXRA7P84157 204 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 KRT72Q14CN4 511 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 POU4F3Q15319 338 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 FAM69AQ5T7M9 428 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 CASP12Q6UXS9 341 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 PGAM4Q8N0Y7 254 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 UBE2J2Q8N2K1 259 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 C10orf53Q8N6V4 93 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 OR9K2Q8NGE7 335 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 FAM162AQ96A26 154 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 APH1AQ96BI3 265 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 SLC41A3Q96GZ6 507 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 MOGAT1Q96PD6 335 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 ZNF385AQ96PM9 386 aaKnown RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 ZNF587Q96SQ5 575 aaPredicted RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 CDRT15Q96T59 188 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 PCDHAC1Q9H158 963 aa11.22□□□□□ -0.61
LSM5-201ENST00000223084 C6orf203Q9P0P8 240 aaPredicted RBP11.22□□□□□ -0.61
LSM5-201ENST00000223084 FAM221AA4D161 298 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 KPNA4O00629 521 aaPredicted RBP11.21□□□□□ -0.61
LSM5-201ENST00000223084 CASKO14936 926 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 SIAH2O43255 324 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 OR2T1O43869 369 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 LYZL6O75951 148 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 THBDP07204 575 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 GGT1P19440 569 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 PSMB1P20618 241 aaKnown RBP11.21□□□□□ -0.61
LSM5-201ENST00000223084 IGHV1-2P23083 117 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 MSX2P35548 267 aaPredicted RBP11.21□□□□□ -0.61
LSM5-201ENST00000223084 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.61
LSM5-201ENST00000223084 TAS2R41P59536 307 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 PIN1Q13526 163 aaPredicted RBP11.21□□□□□ -0.61
LSM5-201ENST00000223084 SFRP5Q5T4F7 317 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 GLYATQ6IB77 296 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 ALKBH2Q6NS38 261 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 TTC33Q6PID6 262 aaPredicted RBP11.21□□□□□ -0.61
LSM5-201ENST00000223084 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 CBLL1Q75N03 491 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 AAED1Q7RTV5 226 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 NKAIN4Q8IVV8 208 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 DEFB107AQ8IZN7 70 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 LZICQ8WZA0 190 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 NRGNQ92686 78 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 S100PBPQ96BU1 408 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 NSL1Q96IY1 281 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 HSH2DQ96JZ2 352 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 EPYCQ99645 322 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 PRSS27Q9BQR3 290 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 TMEM43Q9BTV4 400 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 SF3B5Q9BWJ5 86 aaKnown RBP11.21□□□□□ -0.61
LSM5-201ENST00000223084 POLDIP3Q9BY77 421 aaKnown RBP11.21□□□□□ -0.61
LSM5-201ENST00000223084 AMBRA1Q9C0C7 1298 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 ACTR6Q9GZN1 396 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 FANCFQ9NPI8 374 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 RASSF1Q9NS23 344 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 RIMS3Q9UJD0 308 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 SNX13Q9Y5W8 968 aa11.21□□□□□ -0.61
LSM5-201ENST00000223084 ROS1P08922 2347 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 TACC2O95359 2948 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 B2RBV5 119 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 J3KTA2 159 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 FZD7O75084 574 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 CH25HO95992 272 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 FUT4P22083 530 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 IL1RL1Q01638 556 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 LGALS3BPQ08380 585 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 ITGADQ13349 1161 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 FBXW9Q5XUX1 488 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 FBXW10Q5XX13 1052 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 C16orf89Q6UX73 402 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 Q6ZT83 130 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 CREB3L2Q70SY1 520 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 FKBP9P1Q75LS8 142 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 H1FNTQ75WM6 255 aaPredicted RBP11.2□□□□□ -0.62
LSM5-201ENST00000223084 EPHX4Q8IUS5 362 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 BCAS4Q8TDM0 211 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 TMEM255BQ8WV15 326 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 KISS1RQ969F8 398 aaPredicted RBP11.2□□□□□ -0.62
LSM5-201ENST00000223084 OXGR1Q96P68 337 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 CLEC4MQ9H2X3 399 aaPredicted RBP11.2□□□□□ -0.62
LSM5-201ENST00000223084 B3GAT1Q9P2W7 334 aa11.2□□□□□ -0.62
LSM5-201ENST00000223084 RHCGQ9UBD6 479 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms