RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 MARCH4Q9P2E8 410 aaPredicted RBP13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 FBXL4Q9UKA2 621 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 CEPT1Q9Y6K0 416 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 MITFO75030 526 aaPredicted RBP13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 MRPS10P82664 201 aaKnown RBP13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 EXOSC2Q13868 293 aaKnown RBP13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 ADGRG3Q86Y34 549 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 MINDY1Q8N5J2 469 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 CTDSP1Q9GZU7 261 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 POMT1Q9Y6A1 747 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 SLC16A6O15403 523 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 ACKR3P25106 362 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 TMEM244Q5VVB8 128 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF566Q969W8 418 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 FCRL1Q96LA6 429 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 ENPP5Q9UJA9 477 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 METTL15A6NJ78 407 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 C4orf47A7E2U8 309 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 PBX1P40424 430 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 RAB6CQ53S08 254 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 RHEBL1Q8TAI7 183 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 DUSP19Q8WTR2 217 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 RBM14Q96PK6 669 aaKnown RBP13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 CHST11Q9NPF2 352 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 NXPH2O95156 264 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 CDC34P49427 236 aaPredicted RBP13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 CDK5Q00535 292 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 RABEPKQ7Z6M1 372 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 RAB7BQ96AH8 199 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 FAXDC2Q96IV6 333 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 OR7D2Q96RA2 312 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 OSGIN1Q9UJX0 560 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 A0A1W2PPH5 198 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 G3V3Q6 166 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 SMLR1H3BR10 107 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 FGF18O76093 207 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 NLRC3Q7RTR2 1065 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 ALG12Q9BV10 488 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 SLCO5A1Q9H2Y9 848 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 C11orf49Q9H6J7 331 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 B4GALT6Q9UBX8 382 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 HHLA2Q9UM44 414 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 GABRQQ9UN88 632 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 LAMA4Q16363 1823 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 BMPR1BO00238 502 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 EFSO43281 561 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 RAB40ALP0C0E4 278 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 HMGCLP35914 325 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 BMPR1AP36894 532 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 EDDM3BP56851 147 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 KRTDAPP60985 99 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 SERTAD2Q14140 314 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 TBCEQ15813 527 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 RAB40AQ8WXH6 277 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 RCE1Q9Y256 329 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 TMEM269A0A1B0GVZ9 245 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 DCTN6O00399 190 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 SIM1P81133 766 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 MFSD12Q6NUT3 480 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 PARP16Q8N5Y8 322 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 CORO2AQ92828 525 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 TRIB3Q96RU7 358 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 SGK494L7N484 410 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 FGF3P11487 239 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 MANEALQ5VSG8 457 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 DCAF4L2Q8NA75 395 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 S1PR3Q99500 378 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 TINAGL1Q9GZM7 467 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 STARD5Q9NSY2 213 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 SLC35A3Q9Y2D2 325 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 DBX1A6NMT0 343 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF732B4DXR9 585 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 LDB3O75112 727 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 ITGB8P26012 769 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 FKBP1BP68106 108 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 TECRLQ5HYJ1 363 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 TXNRD3NBQ6F5E7 133 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 CNTN4Q8IWV2 1026 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 LMNTD1Q8N9Z9 388 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 TMEM239Q8WW34 195 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 RIMS4Q9H426 269 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 DDX31Q9H8H2 851 aaKnown RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 SCPEP1Q9HB40 452 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 YTHDF2Q9Y5A9 579 aaKnown RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 DTYMKP23919 212 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 CDKN2DP55273 166 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 KIAA0141Q14154 515 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 PAFAH1B3Q15102 231 aaKnown RBP13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 NADSYN1Q6IA69 706 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 SCAMP4Q969E2 229 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 TRIB1Q96RU8 372 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 FAM183AA6NL82 134 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 LYPLA2O95372 231 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 MMP12P39900 470 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 FAM189BP81408 668 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 DOC2AQ14183 400 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 C6orf132Q5T0Z8 1188 aa13.66□□□□□ -0.22
SPTLC2-201ENST00000216484 H2BFWTQ7Z2G1 175 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms