RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ZNF443Q9Y2A4 671 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-201ENST00000013807 GMEB1Q9Y692 573 aa13.87□□□□□ -0.19
ERCC1-201ENST00000013807 FTCDNL1E5RQL4 147 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 FRS3O43559 492 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 GPRIN2O60269 458 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 BCHEP06276 602 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 PRG2P13727 222 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 HOXB9P17482 250 aaPredicted RBP13.86□□□□□ -0.19
ERCC1-201ENST00000013807 CRATP43155 626 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 FADDQ13158 208 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 TMEM249Q2WGJ8 235 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 C9orf135Q5VTT2 229 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 C1orf140Q5VVS0 124 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 C6orf89Q6UWU4 347 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 MAVSQ7Z434 540 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 EPHX4Q8IUS5 362 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 ANKRD42Q8N9B4 389 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 GTF2H4Q92759 462 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 VPS33AQ96AX1 596 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 AURKBQ96GD4 344 aaPredicted RBP13.86□□□□□ -0.19
ERCC1-201ENST00000013807 TMEM19Q96HH6 336 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 TAPBPLQ9BX59 468 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 LINC00470Q9BZP3 86 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 C12orf10Q9HB07 376 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 MOV10Q9HCE1 1003 aaKnown RBP13.86□□□□□ -0.19
ERCC1-201ENST00000013807 YAE1D1Q9NRH1 226 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 TMEM45AQ9NWC5 275 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 PMF1-BGLAPU3KQ54 211 aa13.86□□□□□ -0.19
ERCC1-201ENST00000013807 ARPC4-TTLL3A0A0A6YYG9 625 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 RPL36A-HNRNPH2H7BZ11 118 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 ZNF432O94892 652 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 IFNA2P01563 188 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 KITP10721 976 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 POLR2JP52435 117 aaKnown RBP13.85□□□□□ -0.19
ERCC1-201ENST00000013807 EGR4Q05215 589 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 BNIP2Q12982 314 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 RGNQ15493 299 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 C6orf52Q5T4I8 152 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 GPAT4Q86UL3 456 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 CADM2Q8N3J6 435 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 ZNF525Q8N782 197 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 LSMEM1Q8N8F7 131 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 OR1K1Q8NGR3 316 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 FAM168AQ92567 244 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 BCL2L2Q92843 193 aaPredicted RBP13.85□□□□□ -0.19
ERCC1-201ENST00000013807 TLCD1Q96CP7 247 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 KATNB1Q9BVA0 655 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 PTDSS2Q9BVG9 487 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 PAIP1Q9H074 479 aaKnown RBP13.85□□□□□ -0.19
ERCC1-201ENST00000013807 A4GALTQ9NPC4 353 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 PCDHB14Q9Y5E9 798 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 ATP23Q9Y6H3 246 aa13.85□□□□□ -0.19
ERCC1-201ENST00000013807 LOC102725191A0A1B0GVB3 256 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 TMEM247A6NEH6 219 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 VWC2LB2RUY7 222 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 ATP6V1G2-DDX39BF2Z307 99 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 UBDO15205 165 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 PDE5AO76074 875 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 ANP32DO95626 131 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 IGLV1-44P01699 117 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 ETS2P15036 469 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 SELENOPP49908 381 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 TBRG1Q3YBR2 411 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 CHRFAM7AQ494W8 412 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 GTDC1Q4AE62 458 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 HIKESHIQ53FT3 197 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 NXNQ6DKJ4 435 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 HMBOX1Q6NT76 420 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 KLHL24Q6TFL4 600 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 LINGO2Q7L985 606 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 SERPINA11Q86U17 422 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 LSRQ86X29 649 aaPredicted RBP13.84□□□□□ -0.19
ERCC1-201ENST00000013807 NANOS1Q8WY41 292 aaKnown RBP13.84□□□□□ -0.19
ERCC1-201ENST00000013807 OR52B2Q96RD2 323 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 RSPO3Q9BXY4 272 aaPredicted RBP13.84□□□□□ -0.19
ERCC1-201ENST00000013807 RAD21L1Q9H4I0 556 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 ADPRHL2Q9NX46 363 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 CDC42EP3Q9UKI2 254 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 RCE1Q9Y256 329 aa13.84□□□□□ -0.19
ERCC1-201ENST00000013807 IGHV1-18A0A0C4DH31 117 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 ZNF587BE7ETH6 402 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 NDUFS8O00217 210 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 CLIC1O00299 241 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 IGKV3-15P01624 115 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 THBS2P35442 1172 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 SH3BGRP55822 239 aaPredicted RBP13.83□□□□□ -0.2
ERCC1-201ENST00000013807 ZNF311Q5JNZ3 666 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 LRIF1Q5T3J3 769 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 ANKRD16Q6P6B7 361 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 EPGNQ6UW88 154 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 C5orf46Q6UWT4 87 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 MIER2Q8N344 545 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 OR9I1Q8NGQ6 314 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 BBS10Q8TAM1 723 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 SLC38A2Q96QD8 506 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 NELFAQ9H3P2 528 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 MOKQ9UQ07 419 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 SVEP1Q4LDE5 3571 aa13.83□□□□□ -0.2
ERCC1-201ENST00000013807 OR2T1O43869 369 aa13.82□□□□□ -0.2
ERCC1-201ENST00000013807 AHSA1O95433 338 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms