RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 AKR1C3P42330 323 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SHC2P98077 582 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 C1orf61Q13536 156 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 FCRLBQ6BAA4 426 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 LCN10Q6JVE6 187 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 OLIG3Q7RTU3 272 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 NUP54Q7Z3B4 507 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 GPAT4Q86UL3 456 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SUMF2Q8NBJ7 301 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 OR52E1Q8NGJ3 308 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 OR6N2Q8NGY6 317 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 BRIX1Q8TDN6 353 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 FAM83CQ9BQN1 747 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 CRLF2Q9HC73 371 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 MAN2C1Q9NTJ4 1040 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 ACER3Q9NUN7 267 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SNX11Q9Y5W9 270 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SEC16AO15027 2179 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 A0A0A6YYH2 397 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 BTBD17A6NE02 478 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 A6NJ64 397 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 GABRPO00591 440 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SYPP08247 313 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 MAPK3P27361 379 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF542PQ5EBM4 170 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 HENMT1Q5T8I9 393 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 PTOV1Q86YD1 416 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 CSNK1A1LQ8N752 337 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 OR4M1Q8NGD0 313 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SFT2D1Q8WV19 159 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 NEURL3Q96EH8 262 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 MS4A4EQ96PG1 132 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 POLDIP3Q9BY77 421 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 KIF25Q9UIL4 384 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 HCFC2Q9Y5Z7 792 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 TSC2P49815 1807 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC5A10A0PJK1 596 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 HYKKA2RU49 373 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 ACOT7O00154 380 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 NPC1O15118 1278 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 TGOLN2O43493 480 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SNRPBP14678 240 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 GRPRP30550 384 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 PRSS3P35030 304 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 HOXA1P49639 335 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 CCNJQ5T5M9 372 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 LILRA6Q6PI73 481 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 METTL27Q8N6F8 245 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 IL17RCQ8NAC3 791 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 WDR20Q8TBZ3 569 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 TMEM163Q8TC26 289 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 MMABQ96EY8 250 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 C16orf58Q96GQ5 468 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 IL21RQ9HBE5 538 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 USP36Q9P275 1121 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 TCRBV16S1A1N1A0A5B0 115 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 MAS1P04201 325 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 ACP2P11117 423 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 ELAVL4P26378 380 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 RNF4P78317 190 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC14A1Q13336 389 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 MSRB3Q8IXL7 192 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 OR5K2Q8NHB8 316 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 SLC7A13Q8TCU3 470 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 TMEM239Q8WW34 195 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 INTS14Q96SY0 518 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 PHB2Q99623 299 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 PITHD1Q9GZP4 211 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 ATG4BQ9Y4P1 393 aa11.26□□□□□ -0.61
TSPAN9-201ENST00000011898 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 NPIPA5A0A0B4J1W7 369 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ETHE1O95571 254 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 KLF8O95600 359 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 FBXO45P0C2W1 286 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 CPN1P15169 458 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF20P17024 532 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ATP5A1P25705 553 aaKnown RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 CSF2RBP32927 897 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 CLDN20P56880 219 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 MFSD13AQ14CX5 517 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 PLK5Q496M5 336 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ACSM3Q53FZ2 586 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 GPR157Q5UAW9 335 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ARHGAP11AQ6P4F7 1023 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 HIST2H3AQ71DI3 136 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 CCDC190Q86UF4 302 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 RBM45Q8IUH3 476 aaKnown RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ZNF561Q8N587 486 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 OR6T1Q8NGN1 323 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 CCDC74BQ96LY2 380 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 MS4A8Q9BY19 250 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 C8orf33Q9H7E9 229 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 PRTFDC1Q9NRG1 225 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 LRFN1Q9P244 771 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 TMEFF2Q9UIK5 374 aaPredicted RBP11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 LAMTOR5O43504 91 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 AK1P00568 194 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 ENTPD8Q5MY95 495 aa11.25□□□□□ -0.61
TSPAN9-201ENST00000011898 P4HA3Q7Z4N8 544 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms