RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 FAM157CP0CG43 387 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 IMPDH2P12268 514 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ACVR1BP36896 505 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 SLC35A1P78382 337 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ALKBH2Q6NS38 261 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ERICH5Q6P6B1 374 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 STAC2Q6ZMT1 411 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 NUFIP2Q7Z417 695 aaKnown RBP16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ATG4DQ86TL0 474 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 OR52E4Q8NGH9 312 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 POTEKPQ9BYX7 375 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 TRIM2Q9C040 744 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ACTR6Q9GZN1 396 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 MYLK2Q9H1R3 596 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 SLCO5A1Q9H2Y9 848 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 BCO1Q9HAY6 547 aa16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 TESQ9UGI8 421 aaKnown RBP16.73■□□□□ 0.27
TRAPPC6A-201ENST00000006275 A8MVM7 634 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 OVOL3O00110 214 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 EIF1BO60739 113 aaKnown RBP16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 LGI1O95970 557 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 SOD3P08294 240 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 HTR2AP28223 471 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 CDKN1AP38936 164 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 DUSP7Q16829 419 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ABLIM2Q6H8Q1 611 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 BEND4Q6ZU67 534 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 CCDC80Q76M96 950 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ARPINQ7Z6K5 226 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 LSMEM1Q8N8F7 131 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 PIGXQ8TBF5 258 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ZNF583Q96ND8 569 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ZNF300Q96RE9 604 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 NAA11Q9BSU3 229 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 PRR14Q9BWN1 585 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 TAPBPLQ9BX59 468 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 EFCAB1Q9HAE3 211 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 TMEM27Q9HBJ8 222 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 FANCFQ9NPI8 374 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ING1Q9UK53 422 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 USP22Q9UPT9 525 aa16.72■□□□□ 0.27
TRAPPC6A-201ENST00000006275 A0A1B0GWA3 101 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ELOA3DA6NLF2 546 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 CCT8L1PA6NM43 557 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ZNF724A8MTY0 619 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 FAM220BPB1ANY3 271 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 TMEM229AB2RXF0 380 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 GPIP06744 558 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 CEACAM7Q14002 265 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 PDK3Q15120 406 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 OR7A5Q15622 319 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 KRTAP24-1Q3LI83 254 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ELOA3BQ3SY89 546 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 RANBP3LQ86VV4 465 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ELOA3Q8NG57 546 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 GPR32P1Q8NGA4 272 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 STK35Q8TDR2 534 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 DNAJA4Q8WW22 397 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 RASSF5Q8WWW0 418 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 FBXW5Q969U6 566 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ZNF775Q96BV0 537 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 TAMM41Q96BW9 452 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 CMTM5Q96DZ9 223 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 ARHGDIGQ99819 225 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 WFDC6Q9BQY6 131 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 C12orf10Q9HB07 376 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 SELENONQ9NZV5 590 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 CDC42EP3Q9UKI2 254 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 AP3M1Q9Y2T2 418 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 RNF115Q9Y4L5 304 aa16.71■□□□□ 0.27
TRAPPC6A-201ENST00000006275 CUBNO60494 3623 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 LIPT2A6NK58 231 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 M0R3H8 397 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 CLOCKO15516 846 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 CD247P20963 164 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 PRDX6P30041 224 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 H3F3AP84243 136 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 OR1Q1Q15612 314 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 NRF1Q16656 503 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 ALG10BQ5I7T1 473 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 C1orf140Q5VVS0 124 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 ADAM5Q6NVV9 412 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 C6orf89Q6UWU4 347 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 TFAP2EQ6VUC0 442 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 CCDC103Q8IW40 242 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 OR2T12Q8NG77 320 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 RNF217Q8TC41 542 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 HOPXQ9BPY8 73 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 AMBRA1Q9C0C7 1298 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 CMTM6Q9NX76 183 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 EMC3Q9P0I2 261 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 ARL2BPQ9Y2Y0 163 aa16.7■□□□□ 0.26
TRAPPC6A-201ENST00000006275 IGKV3D-15A0A087WSY6 115 aa16.69■□□□□ 0.26
TRAPPC6A-201ENST00000006275 ZNF716A6NP11 495 aa16.69■□□□□ 0.26
TRAPPC6A-201ENST00000006275 ZNF814B7Z6K7 855 aa16.69■□□□□ 0.26
TRAPPC6A-201ENST00000006275 TPST2O60704 377 aa16.69■□□□□ 0.26
TRAPPC6A-201ENST00000006275 RAMP1O60894 148 aa16.69■□□□□ 0.26
TRAPPC6A-201ENST00000006275 AHSA1O95433 338 aa16.69■□□□□ 0.26
TRAPPC6A-201ENST00000006275 IGHV4-39P01824 125 aa16.69■□□□□ 0.26
TRAPPC6A-201ENST00000006275 PNMTP11086 282 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms