RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 PCSK5Q92824 1860 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 KIAA1549Q9HCM3 1950 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 NCKAP5O14513 1909 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TRAV27A0A087WT01 109 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 KDM4EB2RXH2 506 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 C21orf140B9A014 251 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 FAM47E-STBD1D6RA91 191 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 CDC42EP2O14613 210 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 PRODHO43272 600 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 KLF4O43474 513 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TLX2O43763 284 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 HCN1O60741 890 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 SLC25A12O75746 678 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 HPP00738 406 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 HMGN1P05114 100 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 FBXO45P0C2W1 286 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 ICAM2P13598 275 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 CPEP16870 476 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 PSMA1P25786 263 aaKnown RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TACR3P29371 465 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 SLC1A3P43003 542 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 CAPZA2P47755 286 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 NOVA1P51513 510 aaKnown RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 SSR4P51571 173 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 CTBP2P56545 445 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 LSM3P62310 102 aaKnown RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 IFITM3Q01628 133 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 ACSM1Q08AH1 577 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 C17orf67Q0P5P2 114 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TPBGQ13641 420 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 QPRTQ15274 297 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TOMM34Q15785 309 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 SSX1Q16384 188 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TSTQ16762 297 aaKnown RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 SYT14P1Q58G82 188 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 SPANXN2Q5MJ10 180 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 ARMC4Q5T2S8 1044 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 BICRALQ6AI39 1079 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 RPL13AP3Q6NVV1 102 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 OPN5Q6U736 354 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TMPRSS11FQ6ZWK6 438 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 BTLAQ7Z6A9 289 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 OAFQ86UD1 273 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TMPRSS12Q86WS5 348 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 RPS19BP1Q86WX3 136 aaKnown RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 OR10G3Q8NGC4 313 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 OR4Q3Q8NH05 313 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TMEM163Q8TC26 289 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 RFKQ969G6 155 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 ITFG2Q969R8 447 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 KIAA1143Q96AT1 154 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 SPACA9Q96E40 222 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 CCNL2Q96S94 520 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 IFT27Q9BW83 186 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 SPRY4Q9C004 299 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 OR51E2Q9H255 320 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 OR52D1Q9H346 318 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 HHATLQ9HCP6 504 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 MEPEQ9NQ76 525 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 P4HTMQ9NXG6 502 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TAS2R10Q9NYW0 307 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 MED11Q9P086 117 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 YARS2Q9Y2Z4 477 aaKnown RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 MRPS18BQ9Y676 258 aaKnown RBP8.06□□□□□ -1.12
PHGDH-219ENST00000641513 CACNA1HO95180 2353 aa8.06□□□□□ -1.12
PHGDH-219ENST00000641513 TMED7-TICAM2A0A0A6YYA0 188 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 LOC101059948A0A1B0GTJ6 334 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 MYL12BO14950 172 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 PRKYO43930 277 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 OR7A10O76100 309 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 MYL12AP19105 171 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 CSRP1P21291 193 aaKnown RBP8.05□□□□□ -1.12
PHGDH-219ENST00000641513 TCEA1P23193 301 aaKnown RBP8.05□□□□□ -1.12
PHGDH-219ENST00000641513 CFL1P23528 166 aaKnown RBP8.05□□□□□ -1.12
PHGDH-219ENST00000641513 F8A1P23610 371 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 PTBP1P26599 531 aaKnown RBP eCLIP8.05□□□□□ -1.12
PHGDH-219ENST00000641513 FGF9P31371 208 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-219ENST00000641513 SLC6A6P31641 620 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 GRK5P34947 590 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 POLR2HP52434 150 aaKnown RBP8.05□□□□□ -1.12
PHGDH-219ENST00000641513 BDH1Q02338 343 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 IL10RAQ13651 578 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 MED22Q15528 200 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 NTRK2Q16620 822 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 PGGHGQ32M88 737 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 PRAMEF20Q5VT98 475 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 CD200R1LQ6Q8B3 271 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 SMARCD3Q6STE5 483 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 LYPD8Q6UX82 237 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 LINC00114Q6XXX2 140 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 ATG4DQ86TL0 474 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-219ENST00000641513 SIRT6Q8N6T7 355 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 OR2T33Q8NG76 320 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 OR4K17Q8NGC6 315 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 GPR119Q8TDV5 335 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 SNRNP27Q8WVK2 155 aaKnown RBP8.05□□□□□ -1.12
PHGDH-219ENST00000641513 TMEM234Q8WY98 164 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 RELTQ969Z4 430 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 DNAJA3Q96EY1 480 aa8.05□□□□□ -1.12
PHGDH-219ENST00000641513 ZNF582Q96NG8 517 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms