RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 SLC35F2Q8IXU6 374 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 POMGNT2Q8NAT1 580 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 BVESQ8NE79 360 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 OR52E1Q8NGJ3 308 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 RPS4Y2Q8TD47 263 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 ARSGQ96EG1 525 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 TNFRSF13CQ96RJ3 184 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 ZC4H2Q9NQZ6 224 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 FBXO34Q9NWN3 711 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
PAX6-280ENST00000640872 SERTAD3Q9UJW9 196 aa12.59□□□□□ -0.39
PAX6-280ENST00000640872 HMSDA8MTL9 139 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 LGALS8O00214 317 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 PDCD5O14737 125 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 LATO43561 262 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 GPRIN2O60269 458 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 FGF19O95750 216 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 GABRA1P14867 456 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 SLC6A6P31641 620 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 NAA10P41227 235 aaPredicted RBP12.58□□□□□ -0.4
PAX6-280ENST00000640872 TNFRSF17Q02223 184 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 CSRP2Q16527 193 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 DCST2Q5T1A1 773 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 PWWP2BQ6NUJ5 590 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 TMUB2Q71RG4 321 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 HSD17B13Q7Z5P4 300 aaPredicted RBP12.58□□□□□ -0.4
PAX6-280ENST00000640872 STPG2Q8N412 459 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 SDR9C7Q8NEX9 313 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 SNX33Q8WV41 574 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 PNPLA2Q96AD5 504 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 DMRTA2Q96SC8 542 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 IL23AQ9NPF7 189 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 SPHK1Q9NYA1 384 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 GNG8Q9UK08 70 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 USP34Q70CQ2 3546 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 SYNDIG1LA6NDD5 238 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 ACOD1A6NK06 481 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 TMEM127O75204 238 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 PROS1P07225 676 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 PTHLHP12272 177 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 PPP3CBP16298 524 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 PSMB10P40306 273 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 RPS15P62841 145 aaKnown RBP12.58□□□□□ -0.4
PAX6-280ENST00000640872 ZNF425Q6IV72 752 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 MTSS1LQ765P7 747 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 DGLUCYQ7Z3D6 616 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 KCT2Q8NC54 265 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 OR52E2Q8NGJ4 325 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 OR1F2PQ96R84 312 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 TAS2R10Q9NYW0 307 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 NCDNQ9UBB6 729 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 CHRNA9Q9UGM1 479 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 OPN4Q9UHM6 478 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 COPS3Q9UNS2 423 aa12.58□□□□□ -0.4
PAX6-280ENST00000640872 GOLGA4Q13439 2230 aaKnown RBP12.58□□□□□ -0.4
PAX6-280ENST00000640872 TCRBV16S1A1N1A0A5B0 115 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 IGLON5A6NGN9 336 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 ANXA2P2A6NMY6 339 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 ARPC5O15511 151 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 VSIG10L2P0DP72 767 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 MYOGP15173 224 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 MNDAP41218 407 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 TPMTP51580 245 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 CLDN12P56749 244 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 ILF3Q12906 894 aaKnown RBP eCLIP12.57□□□□□ -0.4
PAX6-280ENST00000640872 TRMT12Q53H54 448 aaKnown RBP12.57□□□□□ -0.4
PAX6-280ENST00000640872 TMEM69Q5SWH9 247 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 ZNF613Q6PF04 617 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 ZC3H14Q6PJT7 736 aaKnown RBP12.57□□□□□ -0.4
PAX6-280ENST00000640872 VN1R4Q7Z5H5 301 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 OR4N5Q8IXE1 308 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 EIF4E3Q8N5X7 224 aaKnown RBP12.57□□□□□ -0.4
PAX6-280ENST00000640872 OR51L1Q8NGJ5 315 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 OR52B4Q8NGK2 314 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 OR1S1Q8NH92 325 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 SYNPRQ8TBG9 265 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 GRHL3Q8TE85 626 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 BADQ92934 168 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 GAL3ST3Q96A11 431 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 HAVCR1Q96D42 359 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 S100A16Q96FQ6 103 aaKnown RBP12.57□□□□□ -0.4
PAX6-280ENST00000640872 SIPA1Q96FS4 1042 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 TEX101Q9BY14 249 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 TTYH1Q9H313 450 aaPredicted RBP12.57□□□□□ -0.4
PAX6-280ENST00000640872 C2orf42Q9NWW7 574 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 OR5V1Q9UGF6 321 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 KCNK6Q9Y257 313 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 A0A0B4J2E0 115 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 A0A1B0GX12 115 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 OR52A4PA6NMU1 304 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 ACOT7O00154 380 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 NDUFA2O43678 99 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 NGFRP08138 427 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 HIST1H1CP16403 213 aaKnown RBP12.57□□□□□ -0.4
PAX6-280ENST00000640872 CTNNB1P35222 781 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 DLX5P56178 289 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 FHL5Q5TD97 284 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 DNM1P46Q6ZS02 220 aa12.57□□□□□ -0.4
PAX6-280ENST00000640872 GRASPQ7Z6J2 395 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms