RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 OR52E4Q8NGH9 312 aa22.2■■□□□ 1.14
VEGFA-232ENST00000640653 SIKE1Q9BRV8 207 aa22.2■■□□□ 1.14
VEGFA-232ENST00000640653 NPAP1Q9NZP6 1156 aa22.2■■□□□ 1.14
VEGFA-232ENST00000640653 DCTN4Q9UJW0 460 aa22.2■■□□□ 1.14
VEGFA-232ENST00000640653 NPIPB7O75200 414 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 VAMP5O95183 116 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 AHSA1O95433 338 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 ITGA5P08648 1049 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 GPX2P18283 190 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 HOXC5Q00444 222 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 TGFBR3Q03167 851 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 SCARB2Q14108 478 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 GABRA6Q16445 453 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 TSPO2Q5TGU0 170 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 DHRS4L2Q6PKH6 230 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 KLHL17Q6TDP4 642 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 AAED1Q7RTV5 226 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 C10orf111Q8N326 155 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 OR52N5Q8NH56 324 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 SMAP2Q8WU79 429 aaPredicted RBP22.19■■□□□ 1.14
VEGFA-232ENST00000640653 MUS81Q96NY9 551 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 ZNF607Q96SK3 696 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 TRIM2Q9C040 744 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 C12orf10Q9HB07 376 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 NPHS2Q9NP85 383 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 SLC7A10Q9NS82 523 aa22.19■■□□□ 1.14
VEGFA-232ENST00000640653 PRORSD1PA6NEY8 169 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 ELOA3DA6NLF2 546 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-232ENST00000640653 FAM171A2A8MVW0 826 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 PDLIM1O00151 329 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 EDF1O60869 148 aaKnown RBP22.18■■□□□ 1.14
VEGFA-232ENST00000640653 ATP5J2P56134 94 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 ELOA3BQ3SY89 546 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 TMEM108Q6UXF1 575 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 POMGNT2Q8NAT1 580 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 C1orf162Q8NEQ5 155 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-232ENST00000640653 BHLHE22Q8NFJ8 381 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-232ENST00000640653 ELOA3Q8NG57 546 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 NEUROG1Q92886 237 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 RADILQ96JH8 1075 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 IKZF5Q9H5V7 419 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 MGAT4BQ9UQ53 548 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 NDUFAF1Q9Y375 327 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 SLC25A15Q9Y619 301 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 C2CD3Q4AC94 2353 aa22.18■■□□□ 1.14
VEGFA-232ENST00000640653 ABCD4O14678 606 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 ANGPT2O15123 496 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 DANCRP0C864 163 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 GTF2E2P29084 291 aaKnown RBP22.17■■□□□ 1.14
VEGFA-232ENST00000640653 FOXG1P55316 489 aaPredicted RBP22.17■■□□□ 1.14
VEGFA-232ENST00000640653 RUNDC3AQ59EK9 446 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 C6orf89Q6UWU4 347 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 DLEU7Q6UYE1 221 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 DHDDSQ86SQ9 333 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 C17orf78Q8N4C9 275 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 LSMEM1Q8N8F7 131 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 ZIC4Q8N9L1 334 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 HIPK4Q8NE63 616 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 MFSD8Q8NHS3 518 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 COX4I2Q96KJ9 171 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 ZNF385AQ96PM9 386 aaKnown RBP22.17■■□□□ 1.14
VEGFA-232ENST00000640653 CPPED1Q9BRF8 314 aaPredicted RBP22.17■■□□□ 1.14
VEGFA-232ENST00000640653 AMBRA1Q9C0C7 1298 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 SLCO5A1Q9H2Y9 848 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 SLC13A4Q9UKG4 626 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 ANGPT4Q9Y264 503 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 RASD1Q9Y272 281 aa22.17■■□□□ 1.14
VEGFA-232ENST00000640653 H7C1Q1 480 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 SERPINB7O75635 380 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 SOD3P08294 240 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 PTAFRP25105 342 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 MPGP29372 298 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 P2RY4P51582 365 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 CDH11P55287 796 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 NCALDP61601 193 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 C9orf135Q5VTT2 229 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 C5orf46Q6UWT4 87 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 ABHD12BQ7Z5M8 362 aaPredicted RBP22.16■■□□□ 1.14
VEGFA-232ENST00000640653 TSPEARQ8WU66 669 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 DNAJA4Q8WW22 397 aaPredicted RBP22.16■■□□□ 1.14
VEGFA-232ENST00000640653 GTPBP3Q969Y2 492 aaKnown RBP22.16■■□□□ 1.14
VEGFA-232ENST00000640653 TRMT61AQ96FX7 289 aaKnown RBP22.16■■□□□ 1.14
VEGFA-232ENST00000640653 SMR3AQ99954 134 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 ZNF385DQ9H6B1 395 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 FAIMQ9NVQ4 179 aa22.16■■□□□ 1.14
VEGFA-232ENST00000640653 CISD1Q9NZ45 108 aaKnown RBP22.16■■□□□ 1.14
VEGFA-232ENST00000640653 PRR14LQ5THK1 2151 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 A0A0G2JND7 137 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 SHISA9B4DS77 424 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 SASH3O75995 380 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 PNMTP11086 282 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 ZNF83P51522 516 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 ADRM1Q16186 407 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 C1QTNF12Q5T7M4 302 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 CLEC9AQ6UXN8 241 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 PIAS4Q8N2W9 510 aaPredicted RBP22.15■■□□□ 1.14
VEGFA-232ENST00000640653 DPP10Q8N608 796 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 SLC25A36Q96CQ1 311 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 PTDSS2Q9BVG9 487 aa22.15■■□□□ 1.14
VEGFA-232ENST00000640653 ALG2Q9H553 416 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms