RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ADAMTS16Q8TE57 1224 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 PROX1Q92786 737 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 C14orf79Q96F83 325 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 KCNN3Q9UGI6 736 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 CD300AQ9UGN4 299 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 BAG5Q9UL15 447 aa23.69■■□□□ 1.38
VEGFA-231ENST00000640499 NDUFAB1O14561 156 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 EIF1BO60739 113 aaKnown RBP23.68■■□□□ 1.38
VEGFA-231ENST00000640499 IFNA14P01570 189 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 PTNP21246 168 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 KRTAP10-9P60411 292 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 SLC17A1Q14916 467 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 EXOC3L2Q2M3D2 409 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 OTUD3Q5T2D3 398 aaPredicted RBP23.68■■□□□ 1.38
VEGFA-231ENST00000640499 SWT1Q5T5J6 900 aaKnown RBP23.68■■□□□ 1.38
VEGFA-231ENST00000640499 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.68■■□□□ 1.38
VEGFA-231ENST00000640499 VTCN1Q7Z7D3 282 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 FAM156AQ8NDB6 213 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 PIGXQ8TBF5 258 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 KCTD14Q9BQ13 255 aaPredicted RBP23.68■■□□□ 1.38
VEGFA-231ENST00000640499 PRSS27Q9BQR3 290 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 NAA11Q9BSU3 229 aaPredicted RBP23.68■■□□□ 1.38
VEGFA-231ENST00000640499 ADPRHL2Q9NX46 363 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 ADA2Q9NZK5 511 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 SEC14L4Q9UDX3 406 aa23.68■■□□□ 1.38
VEGFA-231ENST00000640499 AQP7P3A6NL99 342 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 AHSA1O95433 338 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 POU2F1P14859 743 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 GGT1P19440 569 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 FUT4P22083 530 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 UGT2B10P36537 528 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 FXNQ16595 210 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 GABRG1Q8N1C3 465 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 ZIC4Q8N9L1 334 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 NSL1Q96IY1 281 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 TPD52L3Q96J77 140 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 TACO1Q9BSH4 297 aaKnown RBP23.67■■□□□ 1.38
VEGFA-231ENST00000640499 EGFL7Q9UHF1 273 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 PRSS50Q9UI38 385 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 SLC9A8Q9Y2E8 581 aa23.67■■□□□ 1.38
VEGFA-231ENST00000640499 TUBAL3A6NHL2 446 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 CHP2O43745 196 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 OR3A2P47893 321 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 STAC2Q6ZMT1 411 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 CBLL1Q75N03 491 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 RNF217Q8TC41 542 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 BCAS4Q8TDM0 211 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 SLC25A36Q96CQ1 311 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 CDRT15Q96T59 188 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 TMEM43Q9BTV4 400 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 ZNF426Q9BUY5 554 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 SLC7A7Q9UM01 511 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 SNX13Q9Y5W8 968 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 FLVCR1Q9Y5Y0 555 aa23.66■■□□□ 1.38
VEGFA-231ENST00000640499 TRAV36DV7A0A075B6V5 113 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 TRAPPC13A5PLN9 417 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 GSTA4O15217 222 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 PEX19P40855 299 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 GDF7Q7Z4P5 450 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 GALNT5Q7Z7M9 940 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 FAM222BQ8WU58 562 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 WFIKKN1Q96NZ8 548 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 TAPBPLQ9BX59 468 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 TACC2O95359 2948 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 NOTCH2Q04721 2471 aa23.65■■□□□ 1.38
VEGFA-231ENST00000640499 FAM221AA4D161 298 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 C16orf97H3BN30 126 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 SERPINA1P01009 418 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 BGLAPP02818 100 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 MSX2P35548 267 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-231ENST00000640499 TLE4Q04727 773 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 PIN1Q13526 163 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-231ENST00000640499 BEND4Q6ZU67 534 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 TSEN54Q7Z6J9 526 aaKnown RBP23.64■■□□□ 1.37
VEGFA-231ENST00000640499 DEFB107AQ8IZN7 70 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 KDM8Q8N371 416 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 RBM15BQ8NDT2 890 aaKnown RBP23.64■■□□□ 1.37
VEGFA-231ENST00000640499 MOGAT1Q96PD6 335 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 AMBRA1Q9C0C7 1298 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 SELENONQ9NZV5 590 aa23.64■■□□□ 1.37
VEGFA-231ENST00000640499 B2RBV5 119 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 LRRN3E7EW58 273 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 EPXP11678 715 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 HSD17B1P14061 328 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 SSTR2P30874 369 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 DAZAP2Q15038 168 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-231ENST00000640499 FAM69AQ5T7M9 428 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 ANKRD34AQ69YU3 496 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 GLYATQ6IB77 296 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 C5orf46Q6UWT4 87 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 DEF8Q6ZN54 512 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 RINLQ6ZS11 566 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 OR9K2Q8NGE7 335 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 OR6S1Q8NH40 331 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 SLC41A3Q96GZ6 507 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 ZNF385AQ96PM9 386 aaKnown RBP23.63■■□□□ 1.37
VEGFA-231ENST00000640499 SLC24A3Q9HC58 644 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 EMC3Q9P0I2 261 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 B3GAT1Q9P2W7 334 aa23.63■■□□□ 1.37
VEGFA-231ENST00000640499 A4GNTQ9UNA3 340 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms