RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MCIDASD6RGH6 385 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 LRRN3E7EW58 273 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 DVL2O14641 736 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 F8A1P23610 371 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 AVPR2P30518 371 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 RORAP35398 523 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 TAS2R43P59537 309 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 CBX3Q13185 183 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 NRARPQ7Z6K4 114 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 C9orf40Q8IXQ3 194 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 PRR22Q8IZ63 422 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 CELF2-AS1Q8N7Q2 184 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 SDR9C7Q8NEX9 313 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 IL17RDQ8NFM7 739 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 OR4K13Q8NH42 304 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 C4orf36Q96KX1 117 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 SLC19A3Q9BZV2 496 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 KLHL21Q9UJP4 597 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 IER3IP1Q9Y5U9 82 aa13.78□□□□□ -0.2
TRIM3-215ENST00000639856 WDFY3Q8IZQ1 3526 aa13.77□□□□□ -0.2
TRIM3-215ENST00000639856 E9PI62 339 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 NTN3O00634 580 aaPredicted RBP13.77□□□□□ -0.21
TRIM3-215ENST00000639856 SEC14L5O43304 696 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 DYRK3O43781 588 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 NCR1O76036 304 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 IL33O95760 270 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 CSF3P09919 207 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 HPGDP15428 266 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 CAPZA2P47755 286 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 RFX2P48378 723 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 MTNR1BP49286 362 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 SELENBP1Q13228 472 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 TRAM1Q15629 374 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 CD226Q15762 336 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 CARTPTQ16568 116 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 LCN10Q6JVE6 187 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 DPY19L2P2Q6ZN68 376 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 SPATC1Q76KD6 591 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 VASH1Q7L8A9 365 aaPredicted RBP13.77□□□□□ -0.21
TRIM3-215ENST00000639856 GATSQ8NAP1 163 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 FAM98AQ8NCA5 519 aaKnown RBP13.77□□□□□ -0.21
TRIM3-215ENST00000639856 CHAC2Q8WUX2 184 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 ADIPOR1Q96A54 375 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 CCNL2Q96S94 520 aaPredicted RBP13.77□□□□□ -0.21
TRIM3-215ENST00000639856 RNF32Q9H0A6 362 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF337Q9Y3M9 751 aa13.77□□□□□ -0.21
TRIM3-215ENST00000639856 J3QLW9 94 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 HPGDSO60760 199 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 OR7A10O76100 309 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 UBL4AP11441 157 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF19P17023 458 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 TPTEP56180 551 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 OR12D2P58182 307 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 WBP2NLQ6ICG8 309 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 MZT2AQ6P582 158 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 ARL9Q6T311 187 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 AKAP14Q86UN6 197 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 PPP1R3BQ86XI6 285 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 NLGN4YQ8NFZ3 816 aaPredicted RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 SMAP2Q8WU79 429 aaPredicted RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 TGIF2Q9GZN2 237 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 ADAM18Q9Y3Q7 739 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 NOX1Q9Y5S8 564 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 IGLV3-12A0A075B6K2 115 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 HTR3EA5X5Y0 456 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 SCDO00767 359 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 ARPC3O15145 178 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 RPL4P36578 427 aaKnown RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 DUSP3P51452 185 aaPredicted RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 RPS4XP62701 263 aaKnown RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 E2F1Q01094 437 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 SKP2Q13309 424 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 ASAH1Q13510 395 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 EBPQ15125 230 aaKnown RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 PYDC2Q56P42 97 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF385CQ66K41 422 aaPredicted RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 CNIH2Q6PI25 160 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 METAP1DQ6UB28 335 aaPredicted RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 OR14A16Q8NHC5 309 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 PHOSPHO1Q8TCT1 267 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 DAZLQ92904 295 aaKnown RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 SOSTQ9BQB4 213 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 AKIRIN1Q9H9L7 192 aaPredicted RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 NRIP3Q9NQ35 241 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 EXOSC3Q9NQT5 275 aaKnown RBP13.76□□□□□ -0.21
TRIM3-215ENST00000639856 R4GN57 208 aa13.76□□□□□ -0.21
TRIM3-215ENST00000639856 IGKV1D-42A0A075B6H8 117 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 LNP1A1A4G5 178 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 FRG2CA6NGY1 282 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 ELOA3DA6NLF2 546 aaPredicted RBP13.75□□□□□ -0.21
TRIM3-215ENST00000639856 IDSB3KWA1 339 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 IGF2P01344 180 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 PNMTP11086 282 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 EVX1P49640 407 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 DCDP81605 110 aaKnown RBP13.75□□□□□ -0.21
TRIM3-215ENST00000639856 GGTLC2Q14390 218 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 TAB1Q15750 504 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 ELOA3BQ3SY89 546 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 SSX6Q7RTT6 188 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms