RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 APOOLQ6UXV4 268 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF704Q6ZNC4 412 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 GPR137CQ8N3F9 429 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 LGALS14Q8TCE9 139 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 SMAP2Q8WU79 429 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 FGF14Q92915 247 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 SLC35B4Q969S0 331 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 CPNE2Q96FN4 548 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 WSB2Q9NYS7 404 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 SLC7A11Q9UPY5 501 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 PCDHGA3Q9Y5H0 932 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 SPTBP11277 2137 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 C2orf72A6NCS6 295 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 HCRTR1O43613 425 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ARSBP15848 533 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 UQCRC1P31930 480 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 GPR50Q13585 617 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 OXA1LQ15070 435 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 USP51Q70EK9 711 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ABHD12BQ7Z5M8 362 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 MRPL38Q96DV4 380 aaKnown RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 SEMA6CQ9H3T2 930 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 NOX4Q9NPH5 578 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 MEPEQ9NQ76 525 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 SRPK3Q9UPE1 567 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 A0A0G2JMP0 313 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 TRDV1A0A1B0GX56 115 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF736B4DX44 427 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 UPK1AO00322 258 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 GOSR2O14653 212 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 CD34P28906 385 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 HCCSP53701 268 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 PER3P56645 1201 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 DUSP6Q16828 381 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 FAM76BQ5HYJ3 339 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ELP2Q6IA86 826 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 LYPD4Q6UWN0 246 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 CD163Q86VB7 1156 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 NLRP8Q86W28 1048 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ARL14Q8N4G2 192 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 OR4M2Q8NGB6 313 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 C19orf43Q9BQ61 176 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 CDCA4Q9BXL8 241 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 NOX3Q9HBY0 568 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 DUSP22Q9NRW4 184 aa13.34□□□□□ -0.27
SCARB2-216ENST00000639300 C19orf53Q9UNZ5 99 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 PTRH2Q9Y3E5 179 aaKnown RBP13.34□□□□□ -0.27
SCARB2-216ENST00000639300 ZNF593O00488 134 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-216ENST00000639300 KNG1P01042 644 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 LCATP04180 440 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF587Q96SQ5 575 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-216ENST00000639300 NRTNQ99748 197 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 NAA11Q9BSU3 229 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF442Q9H7R0 627 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 SERGEFQ9UGK8 458 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 GAPDHSO14556 408 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-216ENST00000639300 CRTAPO75718 401 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-216ENST00000639300 RAD51DO75771 328 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 PRPH2P23942 346 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 SLC22A6Q4U2R8 563 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF767PQ75MW2 155 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 SYT9Q86SS6 491 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 AMER3Q8N944 861 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 PCNPQ8WW12 178 aaKnown RBP13.33□□□□□ -0.28
SCARB2-216ENST00000639300 PRDM9Q9NQV7 894 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 PLEK2Q9NYT0 353 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 ADAM18Q9Y3Q7 739 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 UGT2A1Q9Y4X1 527 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 TRBV11-1A0A0K0K1C0 115 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 SPDEFO95238 335 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 CD14P08571 375 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 SBK2P0C263 348 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 LTBQ06643 244 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 PRSS36Q5K4E3 855 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 TMEM99Q8N816 258 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 MRGPRX1Q96LB2 322 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 SLC5A7Q9GZV3 580 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 WASH6PQ9NQA3 447 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 A3GALT2U3KPV4 340 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 UNC13CQ8NB66 2214 aa13.33□□□□□ -0.28
SCARB2-216ENST00000639300 OR5K3A6NET4 321 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 SYNGR4O95473 234 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 C9orf50Q5SZB4 431 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 BTLAQ7Z6A9 289 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 BBS1Q8NFJ9 593 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 GALNT9Q9HCQ5 603 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 SLC39A1Q9NY26 324 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 CHP2O43745 196 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 RFPL3O75679 317 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 SC5DO75845 299 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 UTS2O95399 124 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 DCNP07585 359 aaKnown RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 PVALBP20472 110 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 TDGQ13569 410 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 ZMAT1Q5H9K5 638 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 PRAMEF20Q5VT98 475 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 AGBL4Q5VU57 503 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF620Q6ZNG0 422 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 OR52N1Q8NH53 320 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 HCAR1Q9BXC0 346 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms