RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 OR11G2Q8NGC1 345 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR5T3Q8NGG3 340 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR10G6Q8NH81 332 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 HRASLSQ9HDD0 168 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 NANSQ9NR45 359 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 RCE1Q9Y256 329 aa18.47■□□□□ 0.55
SYNGAP1-227ENST00000638142 CIB4A0PJX0 185 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 IFITM5A6NNB3 132 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 MCIDASD6RGH6 385 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 RRASP10301 218 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 PSMB1P20618 241 aaKnown RBP18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 PUDPQ08623 228 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 RD3Q7Z3Z2 195 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 SHISA5Q8N114 240 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR52R1Q8NGF1 315 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR2T35Q8NGX2 323 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 CCL4L1Q8NHW4 92 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 RPS4Y2Q8TD47 263 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 SGTBQ96EQ0 304 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 RBP7Q96R05 134 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 MKKSQ9NPJ1 570 aaPredicted RBP18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 FKBP7Q9Y680 259 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 ADRB1P08588 477 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 LCN1P31025 176 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 NFATC4Q14934 902 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZSWIM7Q19AV6 140 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 MANEAQ5SRI9 462 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 METTL11BQ5VVY1 283 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 TMEM65Q6PI78 240 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZNF550Q7Z398 422 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 CA13Q8N1Q1 262 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 FAM71CQ8NEG0 241 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 EVA1BQ9NVM1 165 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 NKIRAS2Q9NYR9 191 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 KLHL9Q9P2J3 617 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 COPS3Q9UNS2 423 aa18.46■□□□□ 0.55
SYNGAP1-227ENST00000638142 A0A1B0GUH1 482 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 A6NCN8 305 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR6C74A6NCV1 312 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 CDK2AP1O14519 115 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 GMDSO60547 372 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 GALR3O60755 368 aaPredicted RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 SSTR2P30874 369 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 SEC13P55735 322 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 PPP2CBP62714 309 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 PPP2CAP67775 309 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 DPY19L2P2Q6ZN68 376 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 PHOSPHO2Q8TCD6 241 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 FAM3CQ92520 227 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 ANKRD9Q96BM1 317 aaPredicted RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 LMF2Q9BU23 707 aaKnown RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 METTL17Q9H7H0 456 aaPredicted RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 BEX1Q9HBH7 125 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 PIN1P1O15428 100 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 SULT1B1O43704 296 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 KIR2DL1P43626 348 aaPredicted RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 GPR143P51810 404 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 RAB14P61106 215 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 PSG6Q00889 435 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNHIT3Q15649 155 aaPredicted RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 SFRP4Q6FHJ7 346 aaPredicted RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 NLRC3Q7RTR2 1065 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 NPEPL1Q8NDH3 523 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 ASB12Q8WXK4 309 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 SLC25A38Q96DW6 304 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 MSANTD3Q96H12 275 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 LCORQ96JN0 433 aaPredicted RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 HSPA12BQ96MM6 686 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 WDR92Q96MX6 357 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 GFI1Q99684 422 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 MRI1Q9BV20 369 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 PLA2G2FQ9BZM2 168 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 SLC6A17Q9H1V8 727 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 CCDC86Q9H6F5 360 aaKnown RBP18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 CAPN10Q9HC96 672 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNF281Q9Y2X9 895 aa18.45■□□□□ 0.54
SYNGAP1-227ENST00000638142 G3V3Q6 166 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 KRT33AO76009 404 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 SLC35E2P0CK97 266 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 DPP4P27487 766 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 RPL4P36578 427 aaKnown RBP18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 PSMB10P40306 273 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 SELENOPP49908 381 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 VSX2P58304 361 aaPredicted RBP18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 HES5Q5TA89 166 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 KIRREL2Q6UWL6 708 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 ADGRG3Q86Y34 549 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR52I2Q8NH67 350 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 ANKRD10Q9NXR5 420 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 ADAM18Q9Y3Q7 739 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 TUBAL3A6NHL2 446 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 ARPC3O15145 178 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 SELENOFO60613 162 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 PPM1BO75688 479 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 SPI1P17947 270 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 MRPS10P82664 201 aaKnown RBP18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 GPR18Q14330 331 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 ISXQ2M1V0 245 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZC3H14Q6PJT7 736 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms