RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TSEN54Q7Z6J9 526 aaKnown RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 ADGRE4PQ86SQ3 457 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 GTF2IRD2Q86UP8 949 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 ADGRG3Q86Y34 549 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 HIPK1Q86Z02 1210 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 LILRA2Q8N149 483 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 CLDN22Q8N7P3 220 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 OR2V1Q8NHB1 315 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 PIGXQ8TBF5 258 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 FAM57AQ8TBR7 257 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 CPT1CQ8TCG5 803 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 SLC7A13Q8TCU3 470 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 TMEM239Q8WW34 195 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 CENPNQ96H22 339 aaPredicted RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 ADGRG7Q96K78 797 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 PRSS27Q9BQR3 290 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 FUZQ9BT04 418 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 TAPBPLQ9BX59 468 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 GABARAPL1Q9H0R8 117 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 SLC6A15Q9H2J7 730 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 RASSF4Q9H2L5 321 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 TP63Q9H3D4 680 aaPredicted RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 EXO5Q9H790 373 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 RNF122Q9H9V4 155 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 S100A14Q9HCY8 104 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 GLRX2Q9NS18 164 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 MAN2C1Q9NTJ4 1040 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 ALKBH4Q9NXW9 302 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 ZNF229Q9UJW7 825 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 MCTS1Q9ULC4 181 aaKnown RBP6.04□□□□□ -1.44
UPF3B-205ENST00000636792 TMCC3Q9ULS5 477 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 NTNG1Q9Y2I2 539 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 V9GYQ6 96 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 ZGRF1Q86YA3 2104 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 FAM208BQ5VWN6 2430 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 MGAQ8IWI9 3026 aa6.04□□□□□ -1.44
UPF3B-205ENST00000636792 KMT2BQ9UMN6 2715 aaPredicted RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 EPG5Q9HCE0 2579 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 IGKV1D-42A0A075B6H8 117 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 A0A087WUU8 490 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 LOC102725191A0A1B0GVB3 256 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 A0A1W2PNV4 684 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 SH3PXD2BA1X283 911 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 CD8B2A6NJW9 211 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 EIF4E1BA6NMX2 242 aaKnown RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 NPIPA5E9PKD4 350 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 H0Y3Z8 333 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 H3BML4 177 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 hCG_2039718K7EN88 272 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 GPR171O14626 319 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 PRRG2O14669 202 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 AKAP8O43823 692 aaKnown RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 ENTPD5O75356 428 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 E2F6O75461 281 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 CCNB2O95067 398 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 LYPD3O95274 346 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 TSPAN19P0C672 248 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 ABOP16442 354 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 TNFRSF1BP20333 461 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 FPR3P25089 353 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 RFC3P40938 356 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 PRPS1P60891 318 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 SLC35A1P78382 337 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 ELF3P78545 371 aaPredicted RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 EGR4Q05215 589 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 PRKCDQ05655 676 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 COX10Q12887 443 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 RNPS1Q15287 305 aaKnown RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 SGCBQ16585 318 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 MICAQ29983 383 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 CTU2Q2VPK5 515 aaKnown RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 RFX4Q33E94 735 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 C1orf140Q5VVS0 124 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 HBMQ6B0K9 141 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 ABLIM2Q6H8Q1 611 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 OR2A2Q6IF42 318 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 GFRALQ6UXV0 394 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 CD300LDQ6UXZ3 194 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 ZNF730Q6ZMV8 503 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 TMPRSS11FQ6ZWK6 438 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 CHMP1BQ7LBR1 199 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 HMGN2P46Q86SG4 172 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 YRDCQ86U90 279 aaKnown RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 GGNQ86UU5 652 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 ATCAYQ86WG3 371 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 RBM45Q8IUH3 476 aaKnown RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 PQLC1Q8N2U9 271 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 CISD2Q8N5K1 135 aaKnown RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 OR4K5Q8NGD3 323 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 OR4C15Q8NGM1 316 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 OR5K1Q8NHB7 308 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 SLCO4A1Q96BD0 722 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 RDH12Q96NR8 316 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 ALPK1Q96QP1 1244 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 TIMP4Q99727 224 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 NAA11Q9BSU3 229 aaPredicted RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 SF3B5Q9BWJ5 86 aaKnown RBP6.03□□□□□ -1.44
UPF3B-205ENST00000636792 ASPNQ9BXN1 380 aa6.03□□□□□ -1.44
UPF3B-205ENST00000636792 DGCR6LQ9BY27 220 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms