RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZFP41Q8N8Y5 198 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 GDPD1Q8N9F7 314 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OR56B1Q8NGI3 324 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OR9I1Q8NGQ6 314 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ARRDC3Q96B67 414 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 REEP6Q96HR9 211 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 AKR1E2Q96JD6 320 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OR11A1Q9GZK7 315 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 MFFQ9GZY8 342 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PPIL3Q9H2H8 161 aaKnown RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 INPP5EQ9NRR6 644 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OR6C2Q9NZP2 312 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CXorf49A8MYA2 514 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-209ENST00000635750 GPR171O14626 319 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SLC16A7O60669 478 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SLIT3O75094 1523 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OPN1LWP04000 364 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 UBE2KP61086 200 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 PNCKQ6P2M8 343 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 BTNL3Q6UXE8 466 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF836Q6ZNA1 936 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 C14orf80Q86SX3 495 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 CD163Q86VB7 1156 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 APCDD1Q8J025 514 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 UBAC2Q8NBM4 344 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SDR9C7Q8NEX9 313 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 OR2M7Q8NG81 312 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ADIPOR1Q96A54 375 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ELMOD3Q96FG2 381 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 SMIM3Q9BZL3 60 aa5.19□□□□□ -1.58
SCN1A-209ENST00000635750 ANKRD61A6NGH8 418 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF487B1APH4 448 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 MKRN2OSH3BPM6 223 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 RAB27BO00194 218 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 PPP1R11O60927 126 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 STSP08842 583 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 HOXB5P09067 269 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF133P52736 654 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 WNT4P56705 351 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 GABARAPL2P60520 117 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TRA2BP62995 288 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 OSTM1Q86WC4 334 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM185AQ8NFB2 350 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 OR51L1Q8NGJ5 315 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ABHD6Q9BV23 337 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 IKZF4Q9H2S9 585 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 NOX3Q9HBY0 568 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TXNL4BQ9NX01 149 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 MROH6A6NGR9 719 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 LRRC3CA6NJW4 275 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TERTO14746 1132 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 NSA2O95478 260 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CD1DP15813 335 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 IL1R2P27930 398 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 HOXC13P31276 330 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SLC5A2P31639 672 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SLC25A11Q02978 314 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 Q1RN00 199 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF468Q5VIY5 522 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 KCTD11Q693B1 232 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 GAREM2Q75VX8 874 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 NDUFAF7Q7L592 441 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SERPINA11Q86U17 422 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 OR10J5Q8NHC4 309 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 BRIX1Q8TDN6 353 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CPNE4Q96A23 557 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 LCORQ96JN0 433 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 NPY6RQ99463 290 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 NUDT22Q9BRQ3 303 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZCCHC4Q9H5U6 513 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ERVMER34-1Q9H9K5 563 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF331Q9NQX6 463 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SLC22A11Q9NSA0 550 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CLEC1BQ9P126 229 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 GIMAP2Q9UG22 337 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF443Q9Y2A4 671 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TCRBV7S3A2A0A539 114 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SLC5A10A0PJK1 596 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SHISA7A6NL88 538 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 AREGP15514 252 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CASP7P55210 303 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ERVK-25P63136 954 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 OR5I1Q13606 314 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 PCLAFQ15004 111 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TP53I3Q53FA7 332 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF322Q6U7Q0 402 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CDC20BQ86Y33 519 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 PLD6Q8N2A8 252 aaKnown RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 CD200R1Q8TD46 325 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 COQ10AQ96MF6 247 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 GAREM1Q9H706 876 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 A0A1W2PQL4 384 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SERTM1A2A2V5 107 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 MEIOCA2RUB1 952 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM221A6NGB7 291 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FIGNL2A6NMB9 653 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 FOXO6A8MYZ6 492 aa5.18□□□□□ -1.58
SCN1A-209ENST00000635750 SLC16A6O15403 523 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms