RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 FUT3P21217 361 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 PAICSP22234 425 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CALB2P22676 271 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 IGHV1-2P23083 117 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 FCARP24071 287 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 HMGB2P26583 209 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NTSP30990 170 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SFNP31947 248 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 PRDX2P32119 198 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 HPDP32754 393 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CDH5P33151 784 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 GCKP35557 465 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NBL1P41271 181 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CCR2P41597 374 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 OR1D4P47884 311 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 STK19P49842 368 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NOVA1P51513 510 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CAV2P51636 162 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NAPAP54920 295 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 UCNP55089 124 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 MTTPP55157 894 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ARPP19P56211 112 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 WNT4P56705 351 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 BDH1Q02338 343 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF85Q03923 595 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CSTF1Q05048 431 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 RGS1Q08116 209 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 HTR4Q13639 388 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ARFRP1Q13795 201 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 DPYSQ14117 519 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 PON2Q15165 354 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CYP51A1Q16850 503 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM74A3Q4VXF1 159 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 TEX44Q53QW1 395 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 MARCH8Q5T0T0 291 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 C1QTNF12Q5T7M4 302 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 N4BP2L1Q5TBK1 243 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF57Q68EA5 555 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 OR5M10Q6IEU7 315 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SULT1C3Q6IMI6 304 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC39A4Q6P5W5 647 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZCCHC12Q6PEW1 402 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 BTNL3Q6UXE8 466 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SCARA5Q6ZMJ2 495 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 FRA10AC1Q70Z53 315 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC22A16Q86VW1 577 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 AMZ2Q86W34 360 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 TICAM2Q86XR7 235 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 HSCBQ8IWL3 235 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CNTN4Q8IWV2 1026 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NRMQ8IXM6 262 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 LRRC43Q8N309 656 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NKAIN3Q8N8D7 197 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 DCAF4L2Q8NA75 395 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZSCAN4Q8NAM6 433 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 GMCL1P1Q8NEA9 526 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF397Q8NF99 534 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 OR2T33Q8NG76 320 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 LINC01006Q8NI28 216 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ITFG1Q8TB96 612 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CNIH3Q8TBE1 160 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF564Q8TBZ8 553 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 FNDC8Q8TC99 324 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 GIPC3Q8TF64 312 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 RLN3Q8WXF3 142 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 DLX4Q92988 240 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NEIL2Q969S2 332 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 MCHR2Q969V1 340 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SLCO4A1Q96BD0 722 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF707Q96C28 371 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 C11orf24Q96F05 449 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 HPDLQ96IR7 371 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 IMMP1LQ96LU5 166 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NOL4LQ96MY1 436 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NDUFAF3Q9BU61 184 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 TM2D1Q9BX74 207 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 GSDMCQ9BYG8 508 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 XPO4Q9C0E2 1151 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 POLR2J2Q9GZM3 115 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SIRPDQ9H106 197 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 POLR2J3Q9H1A7 115 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 OPN3Q9H1Y3 402 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 Q9H3A6 140 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 KAT8Q9H7Z6 458 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NANOGQ9H9S0 305 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 KCNMB3Q9NPA1 279 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 FANCFQ9NPI8 374 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 MEPEQ9NQ76 525 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 YAE1D1Q9NRH1 226 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 PNO1Q9NRX1 252 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 CD274Q9NZQ7 290 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 KCNN3Q9UGI6 736 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 PURGQ9UJV8 347 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF223Q9UK11 482 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 DUSP12Q9UNI6 340 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 NEU3Q9UQ49 428 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 SMC3Q9UQE7 1217 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 PLEKHA6Q9Y2H5 1048 aa0.77□□□□□ -2.29
SMARCB1-209ENST00000635578 IFT52Q9Y366 437 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms