RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 OR6C6A6NF89 314 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 G3V3Y1 287 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 MSR1P21757 451 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 SLC14A1Q13336 389 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF585AQ6P3V2 769 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 C5orf46Q6UWT4 87 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 B3GLCTQ6Y288 498 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 SNX18Q96RF0 628 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 GLIPR2Q9H4G4 154 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 EPHX3Q9H6B9 360 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 EDARQ9UNE0 448 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 RCE1Q9Y256 329 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 NME7Q9Y5B8 376 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 ARGFXA6NJG6 315 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 ACOD1A6NK06 481 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 P2RX6O15547 441 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
SCN8A-209ENST00000627620 SLC35A1P78382 337 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 APOOLQ6UXV4 268 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 BPIFB2Q8N4F0 458 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 LILRA3Q8N6C8 439 aaPredicted RBP11.89□□□□□ -0.51
SCN8A-209ENST00000627620 OR4M1Q8NGD0 313 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 AMDHD1Q96NU7 426 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 C1GALT1Q9NS00 363 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 GMPR2Q9P2T1 348 aaKnown RBP11.89□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF223Q9UK11 482 aaPredicted RBP11.89□□□□□ -0.51
SCN8A-209ENST00000627620 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 CTDSP2O14595 271 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 FCGR2AP12318 317 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 RAB39BQ96DA2 213 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 MALSU1Q96EH3 234 aa11.89□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF486Q96H40 463 aaPredicted RBP11.89□□□□□ -0.51
SCN8A-209ENST00000627620 TMED7-TICAM2A0A0A6YYA0 188 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 A0A0U1RQK1 487 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 SLCO2B1O94956 709 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 GPR19Q15760 415 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 FBXW12Q6X9E4 464 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 NOSIPQ9Y314 301 aaKnown RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 TMED7Q9Y3B3 224 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 IGLV3-10A0A075B6K4 115 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 TRAV36DV7A0A075B6V5 113 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 C2orf72A6NCS6 295 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 CEBPZOSA8MTT3 80 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 TAPBPO15533 448 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 DPM1O60762 260 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 HLA-AP01891 365 aaKnown RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 HOXB5P09067 269 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 GABRA5P31644 462 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 BCL7AQ4VC05 210 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 COX20Q5RI15 118 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF684Q5T5D7 378 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 MIB2Q96AX9 1013 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF578Q96N58 590 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 SLAMF7Q9NQ25 335 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 URB1O60287 2271 aaKnown RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 C7orf72A4D263 438 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 TMEM212A6NML5 194 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 TK1P04183 234 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 POLR2IP36954 125 aaKnown RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 MTCP1P56278 107 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 C17orf67Q0P5P2 114 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 TNK1Q13470 666 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 GPR176Q14439 515 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 DUSP7Q16829 419 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 PAPD4Q6PIY7 484 aaKnown RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 SPRED1Q7Z699 444 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 WFDC5Q8TCV5 224 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 SLC6A18Q96N87 628 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 NMNAT3Q96T66 252 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 PRMT8Q9NR22 394 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 OR7C1O76099 320 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 OR2T7P0C7T2 308 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 SLC35E2P0CK97 266 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 BCL6P41182 706 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 SLC1A3P43003 542 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 IDH3GP51553 393 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 DLX5P56178 289 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 DNAJC5GQ8N7S2 189 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 TMEM185AQ8NFB2 350 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 OR13H1Q8NG92 308 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 OR13C9Q8NGT0 318 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 OR2T27Q8NH04 317 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 MUL1Q969V5 352 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 NEURL3Q96EH8 262 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 SLC46A1Q96NT5 459 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 GAREM1Q9H706 876 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 NXT1Q9UKK6 140 aaKnown RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 A0A1B0GTW7 788 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 ARHGAP33O14559 1287 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 GLSO94925 669 aaPredicted RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 MYOGP15173 224 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 DPP4P27487 766 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 VEGFCP49767 419 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 PFN3P60673 137 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 RPS25P62851 125 aaKnown RBP11.88□□□□□ -0.51
SCN8A-209ENST00000627620 SIRPAP78324 504 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 CSNK1G2P78368 415 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 ZNF750Q32MQ0 723 aa11.88□□□□□ -0.51
SCN8A-209ENST00000627620 CCSMST1Q4G0I0 132 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms