RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 HIP1O00291 1037 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 MED6O75586 246 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 RPS9P46781 194 aaKnown RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 ACTA1P68133 377 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 IL1RL1Q01638 556 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 CSTF1Q05048 431 aaKnown RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 PJVKQ0ZLH3 352 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 SCGB2A2Q13296 93 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 RIPK1Q13546 671 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 MXD4Q14582 209 aaPredicted RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 PSG5Q15238 335 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 SHHQ15465 462 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 CCDC57Q2TAC2 916 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 TMEM41BQ5BJD5 291 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 GPRC6AQ5T6X5 926 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 GDPD3Q7L5L3 318 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 RDH10Q8IZV5 341 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 CENPLQ8N0S6 344 aaPredicted RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 C6orf223Q8N319 242 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 DUSP18Q8NEJ0 188 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 FOPNLQ96NB1 174 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 CCNL2Q96S94 520 aaPredicted RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 CTRCQ99895 268 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 OR11A1Q9GZK7 315 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 POLR1EQ9GZS1 481 aaKnown RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 RWDD1Q9H446 243 aaPredicted RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 EML4Q9HC35 981 aaKnown RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 SMPD3Q9NY59 655 aaPredicted RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 STOX2Q9P2F5 926 aaPredicted RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 U3KQV3 271 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 MAP3K15Q6ZN16 1313 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 LRRC9Q6ZRR7 1453 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 ABCC1P33527 1531 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 DIP2CQ9Y2E4 1556 aa1.93□□□□□ -2.1
VBP1-204ENST00000625964 ZNF142P52746 1687 aaPredicted RBP1.93□□□□□ -2.1
VBP1-204ENST00000625964 IGKV1D-8A0A087WSZ0 117 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 ERVV-1B6SEH8 477 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 C11orf94C9JXX5 98 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 LAD1O00515 517 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 RS1O15537 224 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 NEBLO76041 1014 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 TM7SF2O76062 418 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 LGALS2P05162 132 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 PNMA6AP0CW24 399 aaPredicted RBP1.92□□□□□ -2.1
VBP1-204ENST00000625964 POLR2EP19388 210 aaKnown RBP1.92□□□□□ -2.1
VBP1-204ENST00000625964 CXCR2P25025 360 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 VDAC2P45880 294 aaPredicted RBP1.92□□□□□ -2.1
VBP1-204ENST00000625964 ACADVLP49748 655 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 HSD17B7P56937 341 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 ZNF763Q0D2J5 394 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 BOLA3Q53S33 107 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 PIGGQ5H8A4 983 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 TIGD3Q6B0B8 471 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 KCNIP4Q6PIL6 250 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 SAXO1Q8IYX7 474 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 LRRC43Q8N309 656 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 CLDN19Q8N6F1 224 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 OR10G3Q8NGC4 313 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 OR6C4Q8NGE1 309 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 OR4D9Q8NGE8 314 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 ZNF721Q8TF20 911 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 FGF11Q92914 225 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 C4orf36Q96KX1 117 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 RIT2Q99578 217 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 P2RY13Q9BPV8 354 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 ROGDIQ9GZN7 287 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 DPH5Q9H2P9 285 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 MEAF6Q9HAF1 191 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 NTN4Q9HB63 628 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 RBAKQ9NYW8 714 aaPredicted RBP1.92□□□□□ -2.1
VBP1-204ENST00000625964 DEC1Q9P2X7 70 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 TBK1Q9UHD2 729 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 TBX21Q9UL17 535 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 AK6Q9Y3D8 172 aaKnown RBP1.92□□□□□ -2.1
VBP1-204ENST00000625964 MFHAS1Q9Y4C4 1052 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 SH3TC1Q8TE82 1336 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 MSH6P52701 1360 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 MIA2Q96PC5 1412 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 NUP153P49790 1475 aaKnown RBP1.92□□□□□ -2.1
VBP1-204ENST00000625964 FAM135AQ9P2D6 1515 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 SYNMO15061 1565 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 KDM5CP41229 1560 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 NHSL1Q5SYE7 1610 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 MYO3AQ8NEV4 1616 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 RAPGEF6Q8TEU7 1601 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 STRCP1A6NGW2 1772 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 MROH2AA6NES4 1674 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 ROBO1Q9Y6N7 1651 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 NWD1Q149M9 1564 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 BCL9LQ86UU0 1499 aa1.92□□□□□ -2.1
VBP1-204ENST00000625964 A0A1W2PNV4 684 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 LRCOL1A6NCL2 159 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TRDCB7Z8K6 153 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 DCTN6O00399 190 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 AGPAT2O15120 278 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 ZSCAN12O43309 604 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 OR1F1O43749 312 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 CXCL13O43927 109 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 TRIM16O95361 564 aa1.91□□□□□ -2.1
VBP1-204ENST00000625964 AK1P00568 194 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms