RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 ZNF724A8MTY0 619 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 FAAHO00519 579 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 GPR171O14626 319 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 SMAD9O15198 467 aaKnown RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 ZNF208O43345 1280 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 DNPH1O43598 174 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 CYTIPO60759 359 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 BCAS1O75363 584 aaPredicted RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 SERPINB7O75635 380 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 UBOX5O94941 541 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 PMS2P2O95744 297 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 ADAP00813 363 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 RAF1P04049 648 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 HRGP04196 525 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 FESP07332 822 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 VIMP08670 466 aaKnown RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 GKN3PP0CG01 181 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 CD1EP15812 388 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 RPS4Y1P22090 263 aaKnown RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 CRYGSP22914 178 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 SLC6A2P23975 617 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 ARFIP2P53365 341 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 MVDP53602 400 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 IST1P53990 364 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 SLC35A1P78382 337 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 CDK6Q00534 326 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 P2RY6Q15077 328 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 PAGE3Q5JUK9 113 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 LRIF1Q5T3J3 769 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 RNF220Q5VTB9 566 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 METTL21CQ5VZV1 264 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 WBP2NLQ6ICG8 309 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 REEP3Q6NUK4 255 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 STAC2Q6ZMT1 411 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 ZNF836Q6ZNA1 936 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 NUFIP2Q7Z417 695 aaKnown RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 REC114Q7Z4M0 266 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 GALNT5Q7Z7M9 940 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 FUNDC1Q8IVP5 155 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 UBE2J2Q8N2K1 259 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 NFKBIDQ8NI38 313 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 PIGXQ8TBF5 258 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 STON2Q8WXE9 905 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 KISS1RQ969F8 398 aaPredicted RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 MAL2Q969L2 176 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 ZNF524Q96C55 264 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 DNAJA3Q96EY1 480 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 ACTR6Q9GZN1 396 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 OR10A4Q9H209 315 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 BCO1Q9HAY6 547 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 BCL2L10Q9HD36 194 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 NGBQ9NPG2 151 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 CCM2LQ9NUG4 571 aaPredicted RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 RLIMQ9NVW2 624 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 SELENONQ9NZV5 590 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 C6orf203Q9P0P8 240 aaPredicted RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 TMEM181Q9P2C4 612 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 ST6GALNAC2Q9UJ37 374 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 OSGIN1Q9UJX0 560 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 TRAPPC4Q9Y296 219 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 PLEKHA6Q9Y2H5 1048 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 NOSIPQ9Y314 301 aaKnown RBP5.68□□□□□ -1.5
TCF4-249ENST00000625716 NOTCH2Q04721 2471 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 TMEM72A0PK05 275 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 PRORSD1PA6NEY8 169 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 RGS13O14921 159 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 MRPL33O75394 65 aaKnown RBP5.67□□□□□ -1.5
TCF4-249ENST00000625716 PGM3O95394 542 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 GPIP06744 558 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 INHBBP09529 407 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 ETS2P15036 469 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 PSMB1P20618 241 aaKnown RBP5.67□□□□□ -1.5
TCF4-249ENST00000625716 FPR1P21462 350 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 GTF2E2P29084 291 aaKnown RBP5.67□□□□□ -1.5
TCF4-249ENST00000625716 IDUAP35475 653 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 OR3A2P47893 321 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 NR1H2P55055 460 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 NCALDP61601 193 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 ITGADQ13349 1161 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 NFYCQ13952 458 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 CYLC2Q14093 348 aaPredicted RBP5.67□□□□□ -1.5
TCF4-249ENST00000625716 SCARB2Q14108 478 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 CAPRIN1Q14444 709 aaKnown RBP5.67□□□□□ -1.5
TCF4-249ENST00000625716 PDK3Q15120 406 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 MAPRE2Q15555 327 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 MAPK11Q15759 364 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 CYP51A1Q16850 503 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 MMEL1Q495T6 779 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 RUNDC3AQ59EK9 446 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 BEX5Q5H9J7 111 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 TMEM225Q6GV28 225 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 PAMR1Q6UXH9 720 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 TFAP2EQ6VUC0 442 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 DHDDSQ86SQ9 333 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 CXorf67Q86X51 503 aaPredicted RBP5.67□□□□□ -1.5
TCF4-249ENST00000625716 ARMC8Q8IUR7 673 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 CLIP4Q8N3C7 705 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 TSPEARQ8WU66 669 aa5.67□□□□□ -1.5
TCF4-249ENST00000625716 HSD17B8Q92506 261 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms