RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	TMEM31	Q5JXX7	168 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	CLVS2	Q5SYC1	327 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	COQ10A	Q96MF6	247 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	HSD17B6	O14756	317 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	LTB4R	Q15722	352 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	CCBE1	Q6UXH8	406 aa	Predicted RBP	12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	HYLS1	Q96M11	299 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	CCDC106	Q9BWC9	280 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	C1QTNF2	Q9BXJ5	285 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	LANCL2	Q9NS86	450 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	HSPE1-MOB4	S4R3N1	261 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672		A0A1B0GTW7	788 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	SULT1C2	O00338	296 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	HLA-A	P01891	365 aa	Known RBP	12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	LETMD1	Q6P1Q0	360 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	SLC22A25	Q6T423	547 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	ZFPM2	Q8WW38	1151 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	CDCP1	Q9H5V8	836 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	TMEM59L	Q9UK28	342 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	NXT1	Q9UKK6	140 aa	Known RBP	12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	C4orf47	A7E2U8	309 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	UBAC2	Q8NBM4	344 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	IER2	Q9BTL4	223 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	DDX31	Q9H8H2	851 aa	Known RBP	12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	HBG1	P69891	147 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	HBG2	P69892	147 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	LTB	Q06643	244 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	GALE	Q14376	348 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	CNTN4	Q8IWV2	1026 aa		12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	MRPL43	Q8N983	215 aa	Known RBP	12.93	□□□□□ -0.34
NRXN1-222	ENST00000625672	MMP12	P39900	470 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	RPL35	P42766	123 aa	Known RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	BID	P55957	195 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	GCNT2	Q8N0V5	402 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	OR2T35	Q8NGX2	323 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	PLEKHO2	Q8TD55	490 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	HRH4	Q9H3N8	390 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	C20orf202	A1L168	122 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	GAPDHS	O14556	408 aa	Predicted RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	SLC31A2	O15432	143 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	SMAD6	O43541	496 aa	Known RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	CYBA	P13498	195 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	GLB1L2	Q8IW92	636 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672		H0YGG7	62 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	MITF	O75030	526 aa	Predicted RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	ARHGEF15	O94989	841 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	C1orf105	O95561	183 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	FABP1	P07148	127 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	EMG1	Q92979	244 aa	Known RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	NDRG3	Q9UGV2	375 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	NAP1L6	A6NFF2	107 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	MROH6	A6NGR9	719 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	ZNF593	O00488	134 aa	Predicted RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	LYRM1	O43325	122 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	DOK2	O60496	412 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	RPA2	P15927	270 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	NFYA	P23511	347 aa	Predicted RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	ZNF836	Q6ZNA1	936 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	ANKLE1	Q8NAG6	615 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	TFAP2C	Q92754	450 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	TIMM29	Q9BSF4	260 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	SELENOI	Q9C0D9	397 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	ENPP5	Q9UJA9	477 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	UBE2NL	Q5JXB2	153 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	FAM69A	Q5T7M9	428 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	CENPO	Q9BU64	300 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	COL3A1	P02461	1466 aa	Predicted RBP	12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	LTBP3	Q9NS15	1303 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	SLC6A19	Q695T7	634 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	PRSS48	Q7RTY5	328 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	GLTP	Q9NZD2	209 aa		12.92	□□□□□ -0.34
NRXN1-222	ENST00000625672	FAM166B	A8MTA8	275 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	MT-ND4	P03905	459 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	SNRNP70	P08621	437 aa	Known RBP	12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	CSN1S1	P47710	185 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	TAS2R19	P59542	299 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	MFGE8	Q08431	387 aa	Predicted RBP	12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	FAM78A	Q5JUQ0	283 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	SIMC1	Q8NDZ2	872 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	DCLRE1C	Q96SD1	692 aa	Known RBP	12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	CNTNAP3	Q9BZ76	1288 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	LUZP4	Q9P127	313 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	NPFFR2	Q9Y5X5	522 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	SSTR4	P31391	388 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	EVI2B	P34910	448 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	AHR	P35869	848 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	HNRNPF	P52597	415 aa	Known RBP	12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	MAMDC4	Q6UXC1	1216 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	NPW	Q8N729	165 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	TRUB1	Q8WWH5	349 aa	Known RBP	12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	L3HYPDH	Q96EM0	354 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	BTNL2	Q9UIR0	455 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	PCDHGA5	Q9Y5G8	931 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	HLA-F	P30511	346 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	ETV4	P43268	484 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	C17orf67	Q0P5P2	114 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	MISP	Q8IVT2	679 aa		12.91	□□□□□ -0.34
NRXN1-222	ENST00000625672	CPNE4	Q96A23	557 aa	Predicted RBP	12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms