RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 MON1AQ86VX9 555 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 B3GALNT2Q8NCR0 500 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 OR4F15Q8NGB8 312 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 OR52I2Q8NH67 350 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CD200R1Q8TD46 325 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CSGALNACT1Q8TDX6 532 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 RNF141Q8WVD5 230 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 KLHL5Q96PQ7 755 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 FBXL4Q9UKA2 621 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 TIMM13Q9Y5L4 95 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 TRPV2Q9Y5S1 764 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 MKI67P46013 3256 aaKnown RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 PYCARD-AS1I3L0S3 204 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 EMC8O43402 210 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 NME6O75414 186 aaPredicted RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 RDH16O75452 317 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 NDUFB6O95139 128 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 F10P00742 488 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 SNRPCP09234 159 aaKnown RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 CDH11P55287 796 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 PTSQ03393 145 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 ACVR1Q04771 509 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 RING1Q06587 406 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 TAF13Q15543 124 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 TEAD2Q15562 447 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 SLC25A30Q5SVS4 291 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 GLT8D1Q68CQ7 371 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 ACSM5Q6NUN0 579 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 NOXRED1Q6NXP6 359 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 SMARCD3Q6STE5 483 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 ARL9Q6T311 187 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 IL34Q6ZMJ4 242 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 ZNF596Q8TC21 504 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 FAM122AQ96E09 287 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 CMTM7Q96FZ5 175 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 APIPQ96GX9 242 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 ZNF514Q96K75 400 aaPredicted RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 MESP1Q9BRJ9 268 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 LINC00597Q9H2U6 94 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 PTGES2Q9H7Z7 377 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 MAN2C1Q9NTJ4 1040 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 MRPS18AQ9NVS2 196 aaKnown RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 ABRACLQ9P1F3 81 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 IL20RAQ9UHF4 553 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 M0R036 132 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 TOX3O15405 576 aaPredicted RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 SH3BGRLO75368 114 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 ATP1B1P05026 303 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 H1F0P07305 194 aaKnown RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 ASGR2P07307 311 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 C1SP09871 688 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 SLC2A1P11166 492 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 LAMP1P11279 417 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 MAT2AP31153 395 aaKnown RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 DLSTP36957 453 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 OMPP47874 163 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 WNT3P56703 355 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 NRG3P56975 720 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 SEMG2Q02383 582 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 PRKCZQ05513 592 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 LRRC37A5PQ49AS3 106 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 SCGB2B2Q4G0G5 96 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 ACTBL2Q562R1 376 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 C10orf120Q5SQS8 335 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 UNQ6126/PRO20091Q6UXV3 157 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 LINGO4Q6UY18 593 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 NPSR1Q6W5P4 371 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 FOXRED2Q8IWF2 684 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 FAM24BQ8N5W8 94 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 LRRC52Q8N7C0 313 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 BRIX1Q8TDN6 353 aaKnown RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 RFKQ969G6 155 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 F2RL3Q96RI0 385 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 TEAD3Q99594 435 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 C16orf70Q9BSU1 422 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 HRH4Q9H3N8 390 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 SFXN1Q9H9B4 322 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 RHOFQ9HBH0 211 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 KRCC1Q9NPI7 259 aaPredicted RBP7.32□□□□□ -1.24
VPS11-209ENST00000622309 SPG21Q9NZD8 308 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 NOD1Q9Y239 953 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 SLC35A3Q9Y2D2 325 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 BPTFQ12830 3046 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 GBF1Q92538 1859 aa7.32□□□□□ -1.24
VPS11-209ENST00000622309 ANKRD61A6NGH8 418 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 SULT2B1O00204 365 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 TRBC1P01850 177 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 VSIG10L2P0DP72 767 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 CCND3P30281 292 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 MAP3K8P41279 467 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 GAS1P54826 345 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 CPTPQ5TA50 214 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 RNF165Q6ZSG1 346 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 NRROSQ86YC3 692 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 CDK20Q8IZL9 346 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 MUC20Q8N307 709 aaPredicted RBP7.31□□□□□ -1.24
VPS11-209ENST00000622309 PRSS35Q8N3Z0 413 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 HORMAD2Q8N7B1 307 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 OR4D9Q8NGE8 314 aa7.31□□□□□ -1.24
VPS11-209ENST00000622309 OR56B1Q8NGI3 324 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms