RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ISCA2Q86U28 154 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 C3orf30Q96M34 536 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 FOXN4Q96NZ1 517 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 FRS3O43559 492 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 EDF1O60869 148 aaKnown RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 OR7A10O76100 309 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 MAGEA5P43359 124 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 PNLIPRP2P54317 469 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 TATDN3Q17R31 274 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 CCSMST1Q4G0I0 132 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 C1orf140Q5VVS0 124 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 AWAT2Q6E213 333 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 UBE2Q1Q7Z7E8 422 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 PERPQ96FX8 193 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 NELFAQ9H3P2 528 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 MOSPD3O75425 235 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 INSM1Q01101 510 aaPredicted RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 B3GNT8Q7Z7M8 397 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 D2HGDHQ8N465 521 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF709Q8N972 641 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 OR56B2PQ8NGI1 322 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 MS4A6EQ96DS6 147 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 LRR1Q96L50 414 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 PIP5K1AQ99755 562 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 AMDHD2Q9Y303 409 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 NME7Q9Y5B8 376 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 HRH3Q9Y5N1 445 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 COL11A2P13942 1736 aaPredicted RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 C5orf49A4QMS7 147 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 EPHA1P21709 976 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 TIFABQ6ZNK6 161 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 CCDC71Q8IV32 467 aaPredicted RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 OR13J1Q8NGT2 312 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 QRSL1Q9H0R6 528 aaKnown RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 RIMS3Q9UJD0 308 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 GSTT1P30711 240 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 GPR6P46095 362 aaPredicted RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 RAB13P51153 203 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 RAB14P61106 215 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 ESPNLQ6ZVH7 1005 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 MDGA2Q7Z553 956 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 ACOT12Q8WYK0 555 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 NMUR2Q9GZQ4 415 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 TRAPPC2LQ9UL33 140 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 A0A0X1KG70 313 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 SLC22A31A6NKX4 558 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 NPPAP01160 153 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 F13BP05160 661 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 ITGAMP11215 1152 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 TMEM139Q8IV31 216 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 KLHL31Q9H511 634 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 CCM2LQ9NUG4 571 aaPredicted RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 FOXD3Q9UJU5 478 aaPredicted RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 OR6C70A6NIJ9 312 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 PRAMEF4O60810 478 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 LYZL6O75951 148 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF432O94892 652 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 LSM3P62310 102 aaKnown RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 ZXDBP98169 803 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 OR1Q1Q15612 314 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 VMACQ2NL98 169 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 TMEM65Q6PI78 240 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 SLC36A1Q7Z2H8 476 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 PHTF2Q8N3S3 785 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 OR1J1Q8NGS3 322 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 OR4K15Q8NH41 348 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 AGAP11Q8TF27 550 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 PTPMT1Q8WUK0 201 aaPredicted RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 MRGPRX4Q96LA9 322 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 POLR2J2Q9GZM3 115 aaKnown RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 FN3KRPQ9HA64 309 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 KCNN3Q9UGI6 736 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 TESQ9UGI8 421 aaKnown RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 KCNMB2Q9Y691 235 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 COMMD3-BMI1R4GMX3 469 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 PLXNB2O15031 1838 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 PYCARD-AS1I3L0S3 204 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 CASC3O15234 703 aaKnown RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 RGS11O94810 467 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 NPPBP16860 134 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 PRDX6P30041 224 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 LETMD1Q6P1Q0 360 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 PDLIM5Q96HC4 596 aaKnown RBP10.03□□□□□ -0.8
POLR2A-209ENST00000617998 INTS14Q96SY0 518 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 SHARPINQ9H0F6 387 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 FBXO34Q9NWN3 711 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 TIMM10BQ9Y5J6 103 aa10.03□□□□□ -0.8
POLR2A-209ENST00000617998 M0R233 179 aa10.02□□□□□ -0.8
POLR2A-209ENST00000617998 CRHBPP24387 322 aa10.02□□□□□ -0.8
POLR2A-209ENST00000617998 AKR1C2P52895 323 aa10.02□□□□□ -0.8
POLR2A-209ENST00000617998 IL18Q14116 193 aa10.02□□□□□ -0.8
POLR2A-209ENST00000617998 SCGB2B2Q4G0G5 96 aa10.02□□□□□ -0.8
POLR2A-209ENST00000617998 GLB1L2Q8IW92 636 aa10.02□□□□□ -0.8
POLR2A-209ENST00000617998 MYOZ1Q9NP98 299 aaPredicted RBP10.02□□□□□ -0.8
POLR2A-209ENST00000617998 A0A087WXM4 84 aa10.02□□□□□ -0.81
POLR2A-209ENST00000617998 SLC22A2O15244 555 aa10.02□□□□□ -0.81
POLR2A-209ENST00000617998 SLC19A2O60779 497 aa10.02□□□□□ -0.81
POLR2A-209ENST00000617998 ICOSLGO75144 302 aa10.02□□□□□ -0.81
POLR2A-209ENST00000617998 ATP1A1-AS1Q5TC04 95 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms