RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 NDNFQ8TB73 568 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 SH3YL1Q96HL8 342 aaPredicted RBP18.59■□□□□ 0.57
SDHA-220ENST00000617470 TEX12Q9BXU0 123 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 FGF20Q9NP95 211 aaPredicted RBP18.59■□□□□ 0.57
SDHA-220ENST00000617470 HPF1Q9NWY4 346 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 PLA2G3Q9NZ20 509 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 PTPRQQ9UMZ3 2332 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 EXPH5Q8NEV8 1989 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 PPM1BO75688 479 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 TGFBR1P36897 503 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 MTNR1AP48039 350 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 RGS6P49758 472 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 VBP1P61758 197 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 NCS1P62166 190 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 MED22Q15528 200 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 SLC35F1Q5T1Q4 408 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 ZNF468Q5VIY5 522 aaPredicted RBP18.59■□□□□ 0.57
SDHA-220ENST00000617470 CPOQ8IVL8 374 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 NANOGP1Q8N7R0 232 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 SPACA9Q96E40 222 aaPredicted RBP18.59■□□□□ 0.57
SDHA-220ENST00000617470 PLEKHA8Q96JA3 519 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 MGLLQ99685 303 aa18.59■□□□□ 0.57
SDHA-220ENST00000617470 FAM183AA6NL82 134 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 RAB36O95755 333 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 GADD45AP24522 165 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 CASRP41180 1078 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 ETV1P50549 477 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 RAB40BQ12829 278 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 SNRNP27Q8WVK2 155 aaKnown RBP18.58■□□□□ 0.56
SDHA-220ENST00000617470 SGTBQ96EQ0 304 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 CNTNAP3BQ96NU0 1288 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 OPALINQ96PE5 141 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 IFT27Q9BW83 186 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 TAPBPLQ9BX59 468 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 HCAR1Q9BXC0 346 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 CNTNAP3Q9BZ76 1288 aa18.58■□□□□ 0.56
SDHA-220ENST00000617470 OR6C70A6NIJ9 312 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 SLC22A1O15245 554 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 CEACAM4O75871 244 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 WDPCPO95876 746 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 BCL10O95999 233 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 FBXO45P0C2W1 286 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 HSMCR30P0CW71 290 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 CYB561P49447 251 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 CDH11P55287 796 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 DBPQ10586 325 aaPredicted RBP18.57■□□□□ 0.56
SDHA-220ENST00000617470 KLHL22Q53GT1 634 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 NXNL2Q5VZ03 156 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 C19orf48Q6RUI8 117 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 LYPD8Q6UX82 237 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 TBC1D15Q8TC07 691 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 UTP23Q9BRU9 249 aaKnown RBP18.57■□□□□ 0.56
SDHA-220ENST00000617470 TIMMDC1Q9NPL8 285 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 ACACBO00763 2458 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 NDUFB5O43674 189 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 WISP1O95388 367 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 MFAP5Q13361 173 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 TOMM34Q15785 309 aaPredicted RBP18.57■□□□□ 0.56
SDHA-220ENST00000617470 SSX1Q16384 188 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 RTL4Q6ZR62 310 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 CXXC5Q7LFL8 322 aaKnown RBP18.57■□□□□ 0.56
SDHA-220ENST00000617470 SHFQ7M4L6 423 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 PROKR2Q8NFJ6 384 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 OR10G3Q8NGC4 313 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 ADAM19Q9H013 955 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 MED20Q9H944 212 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 CMC2Q9NRP2 79 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 ERGIC3Q9Y282 383 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 MGAQ8IWI9 3026 aa18.57■□□□□ 0.56
SDHA-220ENST00000617470 TPRP12270 2363 aaKnown RBP18.56■□□□□ 0.56
SDHA-220ENST00000617470 MKRN2OSH3BPM6 223 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 HCRTR2O43614 444 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 PPP1R3DO95685 299 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 PNMTP11086 282 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 NAGAP17050 411 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 EVI2BP34910 448 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 ARG2P78540 354 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 EGR4Q05215 589 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 ZNF791Q3KP31 576 aaPredicted RBP18.56■□□□□ 0.56
SDHA-220ENST00000617470 PLBD1Q6P4A8 553 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 ATCAYQ86WG3 371 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 PTP4A1Q93096 173 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 ARHGAP9Q9BRR9 750 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 TBL1XR1Q9BZK7 514 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 SLC19A3Q9BZV2 496 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 FN3KQ9H479 309 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 PCNX3Q9H6A9 2034 aa18.56■□□□□ 0.56
SDHA-220ENST00000617470 ELOA3DA6NLF2 546 aaPredicted RBP18.55■□□□□ 0.56
SDHA-220ENST00000617470 SNTNA6NMZ2 147 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 GMFGO60234 142 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 HTR1FP30939 366 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 CD96P40200 585 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 SLC1A3P43003 542 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 EFR3AQ14156 821 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 SPHARQ15513 63 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 NTRK2Q16620 822 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 TSTQ16762 297 aaKnown RBP18.55■□□□□ 0.56
SDHA-220ENST00000617470 ELOA3BQ3SY89 546 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 TUBA3EQ6PEY2 450 aa18.55■□□□□ 0.56
SDHA-220ENST00000617470 ELOA3Q8NG57 546 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms