RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 TMEM150CB9EJG8 249 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 BLOC1S5-TXNDC5H3BN57 136 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 GABRPO00591 440 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 WNT1P04628 370 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 POU3F2P20265 443 aaPredicted RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 RPL35P42766 123 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 SLC3A1Q07837 685 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 PUDPQ08623 228 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 FAM53BQ14153 422 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 FAM27D1Q5T7N8 215 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 TMEM184AQ6ZMB5 413 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 CDK20Q8IZL9 346 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 ZNF321PQ8N8H1 164 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 NECAB3Q96P71 396 aaPredicted RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 DGAT2Q96PD7 388 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 TNFRSF13CQ96RJ3 184 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 RNF32Q9H0A6 362 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 PILRAQ9UKJ1 303 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 ZFHX2Q9C0A1 2572 aaPredicted RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 C2orf72A6NCS6 295 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 GALR3O60755 368 aaPredicted RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 ADAM11O75078 769 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 MTRF1O75570 445 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 MT-ND4P03905 459 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 TEAD1P28347 426 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 IFNGR2P38484 337 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 PI4KAP42356 2102 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 ODF4Q2M2E3 257 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 CLLU1Q5K131 121 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 C17orf107Q6ZR85 190 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 SYT9Q86SS6 491 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 ZNF527Q8NB42 609 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 OR4C3Q8NH37 302 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 FLVCR1-AS1Q8TAF5 88 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 OR52D1Q9H346 318 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 SMOC1Q9H4F8 434 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 ISG20L2Q9H9L3 353 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 SDHAF2Q9NX18 166 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 ADAM30Q9UKF2 790 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 DIMT1Q9UNQ2 313 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 LIPT1Q9Y234 373 aa13.32□□□□□ -0.28
SHROOM1-208ENST00000617339 IGHV3-20A0A0C4DH32 117 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 KDM4BO94953 1096 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 PPP1R3DO95685 299 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 HTR2AP28223 471 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 SLC6A1P30531 599 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 VWA2Q5GFL6 755 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 ARL9Q6T311 187 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 THSD4Q6ZMP0 1018 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 C16orf47Q6ZP98 133 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 CA13Q8N1Q1 262 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 HINT3Q9NQE9 182 aaKnown RBP13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 PRTFDC1Q9NRG1 225 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 BAIAP2Q9UQB8 552 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 TMEM184BQ9Y519 407 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 BCAT2O15382 392 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 ALDOBP05062 364 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 CFL1P23528 166 aaKnown RBP13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 CLVS2Q5SYC1 327 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 FAM69BQ5VUD6 431 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 ALKAL2Q6UX46 152 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 RANBP3LQ86VV4 465 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 FAM98AQ8NCA5 519 aaKnown RBP13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 ZNF563Q8TA94 476 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 GIMAP1Q8WWP7 306 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 MARVELD3Q96A59 401 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 DDOQ99489 341 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 CACNG6Q9BXT2 260 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 GSX2Q9BZM3 304 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 DPAGT1Q9H3H5 408 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 A6NCN8 305 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 C4orf47A7E2U8 309 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 J3QLW9 94 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 ZNF19P17023 458 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 ESPNLQ6ZVH7 1005 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 IZUMO1Q8IYV9 350 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 GNPDA2Q8TDQ7 276 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 DIO2Q92813 273 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 ORAI1Q96D31 301 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 NDC1Q9BTX1 674 aa13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 PITHD1Q9GZP4 211 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-208ENST00000617339 A0A1W2PPC4 97 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 OR5K4A6NMS3 321 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 TCRBP04435 133 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 GBX2P52951 348 aaPredicted RBP13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 OR10A3P58181 314 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 ST3GAL2Q16842 350 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 SFRP4Q6FHJ7 346 aaPredicted RBP13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 OAFQ86UD1 273 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 GPAT4Q86UL3 456 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 SDR9C7Q8NEX9 313 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 OR6K6Q8NGW6 343 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 FANK1Q8TC84 345 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 TMEM239Q8WW34 195 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 ACOT11Q8WXI4 607 aaPredicted RBP13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 SGTBQ96EQ0 304 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 KLHL15Q96M94 604 aa13.3□□□□□ -0.28
SHROOM1-208ENST00000617339 CD180Q99467 661 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms