RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	LRRC31	Q6UY01	552 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	HSDL2	Q6YN16	418 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	NUDCD3	Q8IVD9	361 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	TPRX1	Q8N7U7	411 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	OR4F6	Q8NGB9	312 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	OR4K14	Q8NGD5	310 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	RHOXF1	Q8NHV9	184 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	PAGE5	Q96GU1	130 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	PLEKHA8	Q96JA3	519 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	NCOR1P1	Q9H4R4	102 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF702P	Q9H963	129 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	FOLH1B	Q9HBA9	442 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087		Q9UF83	564 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	DCDC2	Q9UHG0	476 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	UBQLN1	Q9UMX0	589 aa	Known RBP	4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	RLF	Q13129	1914 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	SH3TC1	Q8TE82	1336 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	ERCC6	Q03468	1493 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	IGKV1D-8	A0A087WSZ0	117 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	TUBAL3	A6NHL2	446 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	OR5B21	A6NL26	309 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	TCP11X1	B4DZS4	312 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	HCRTR1	O43613	425 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	LGI1	O95970	557 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087		P04436	131 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	GIG44	P09565	113 aa	Predicted RBP	4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	CT62	P0C5K7	136 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	KPNA2	P52292	529 aa	Known RBP	4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	TGM3	Q08188	693 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	SCRN3	Q0VDG4	424 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	MICB	Q29980	383 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	MARC1	Q5VT66	337 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	UNQ9370/PRO34162	Q6UXP9	181 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	BAIAP2L2	Q6UXY1	529 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	PPP1R27	Q86WC6	154 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF677	Q86XU0	584 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	PSTK	Q8IV42	348 aa	Known RBP	4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	CEP112	Q8N8E3	955 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF184	Q99676	751 aa	Predicted RBP	4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	NEK6	Q9HC98	313 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	HOXC10	Q9NYD6	342 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	KLHL21	Q9UJP4	597 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	KCNIP3	Q9Y2W7	256 aa		4.13	□□□□□ -1.75
PVT1-225	ENST00000617087	LOC110117498-PIK3R3	F6TDL0	507 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	HIP1	O00291	1037 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	TBL1X	O60907	577 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	SERF1A	O75920	110 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	OR7A10	O76100	309 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	IGHV3-23	P01764	117 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	KRT14	P02533	472 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	CCDC166	P0CW27	439 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	RBMY1C	P0DJD4	496 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	NTS	P30990	170 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	HNRNPH3	P31942	346 aa	Known RBP	4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	VHL	P40337	213 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	GNMT	Q14749	295 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	SAMD4B	Q5PRF9	694 aa	Known RBP	4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	RAET1L	Q5VY80	246 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	MOB1B	Q7L9L4	216 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	ARC	Q7LC44	396 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	FTMT	Q8N4E7	242 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	ELMO1	Q92556	727 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	FGF11	Q92914	225 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	MBOAT4	Q96T53	435 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	CHP1	Q99653	195 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	MRPL45	Q9BRJ2	306 aa	Known RBP	4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	CENPK	Q9BS16	269 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	FAIM2	Q9BWQ8	316 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	DEFB126	Q9BYW3	111 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	SELENOI	Q9C0D9	397 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	EXO5	Q9H790	373 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	TTC21B	Q7Z4L5	1316 aa		4.12	□□□□□ -1.75
PVT1-225	ENST00000617087	TOP2A	P11388	1531 aa	Known RBP	4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	KIF21A	Q7Z4S6	1674 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	IGHV1OR21-1	A0A087WYE8	117 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	SERTM2	A0A1B0GWG4	89 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	OR2AG2	A6NM03	316 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	KRT6A	P02538	564 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	ASGR1	P07306	291 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	FGF4	P08620	206 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	TNNI1	P19237	187 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	CHML	P26374	656 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	CDH6	P55285	790 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	EGFEM1P	Q0D2K5	195 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	PARP15	Q460N3	678 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	PRR30	Q53SZ7	412 aa	Predicted RBP	4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	C11orf71	Q6IPW1	123 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	SLC25A48	Q6ZT89	311 aa	Known RBP	4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	SLC39A11	Q8N1S5	342 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF525	Q8N782	197 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	GLRX2	Q9NS18	164 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	STARD10	Q9Y365	291 aa		4.11	□□□□□ -1.75
PVT1-225	ENST00000617087	MBTPS2	O43462	519 aa		4.1	□□□□□ -1.75
PVT1-225	ENST00000617087	TOM1	O60784	492 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms