RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GRPRP30550 384 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 ADH7P40394 386 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 C19orf57Q0VDD7 668 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 ISXQ2M1V0 245 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 MEDAGQ5VYS4 303 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 BTLAQ7Z6A9 289 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 NLGN4YQ8NFZ3 816 aaPredicted RBP7.08□□□□□ -1.28
NEK3-207ENST00000617054 TBC1D15Q8TC07 691 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 ARL5BQ96KC2 179 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 RASL10BQ96S79 203 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 TEAD3Q99594 435 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 LAT2Q9GZY6 243 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 TPK1Q9H3S4 243 aa7.08□□□□□ -1.28
NEK3-207ENST00000617054 SPIN1Q9Y657 262 aaPredicted RBP7.08□□□□□ -1.28
NEK3-207ENST00000617054 CEP250Q9BV73 2442 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 IGHV1-45A0A0A0MS14 117 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 OR6C70A6NIJ9 312 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 TTC36A6NLP5 189 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 OR6C76A6NM76 312 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 C9orf172C9J069 976 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 DVL2O14641 736 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 GPX5O75715 221 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ZFAND5O76080 213 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 NADKO95544 446 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 HMGN1P05114 100 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 GP1BAP07359 652 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 PEPDP12955 493 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 NAA10P41227 235 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 RPS27P42677 84 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 RBM34P42696 430 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 MXD1Q05195 221 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ZNF74Q16587 644 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 NXNL2Q5VZ03 156 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 LRRC69Q6ZNQ3 347 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ADGRG3Q86Y34 549 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 OR10H4Q8NGA5 316 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 OR5W2Q8NH69 310 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ZHX1-C8orf76Q96EF9 292 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 DCLRE1CQ96SD1 692 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 TEX12Q9BXU0 123 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 SLC26A1Q9H2B4 701 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 MMP25Q9NPA2 562 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 PARD6AQ9NPB6 346 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 CMC2Q9NRP2 79 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ASB6Q9NWX5 421 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 FBXL2Q9UKC9 423 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 TMEM5Q9Y2B1 443 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ATMQ13315 3056 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 TEX13CA0A0J9YWL9 993 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 TMEM72A0PK05 275 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 SLC35F4A4IF30 521 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 OR6C68A6NDL8 312 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 C12orf71A8MTZ7 269 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 C9J4A7 227 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 OR7A10O76100 309 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 NDUFB2O95178 105 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 GUSBP08236 651 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 COX6A1P12074 109 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 PIPP12273 146 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 MYL12AP19105 171 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 P2RX1P51575 399 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ROR2Q01974 943 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 TEKQ02763 1124 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 TRA2AQ13595 282 aaKnown RBP eCLIP7.07□□□□□ -1.28
NEK3-207ENST00000617054 ZNF468Q5VIY5 522 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 B3GNTL1Q67FW5 361 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 NIPAL3Q6P499 406 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 PLEKHG7Q6ZR37 379 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 OR11G2Q8NGC1 345 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 B4GALNT2Q8NHY0 566 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ADAM19Q9H013 955 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 CDCP1Q9H5V8 836 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 METTL7AQ9H8H3 244 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 NCDNQ9UBB6 729 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 TNFRSF10DQ9UBN6 386 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 PADI1Q9ULC6 663 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 DIMT1Q9UNQ2 313 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 MED13Q9UHV7 2174 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 RIIAD1A6NNX1 92 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 DCTN6O00399 190 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 SUSD5O60279 629 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ZNF806P0C7X5 589 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 PAICSP22234 425 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 HTR1FP30939 366 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 SLC6A6P31641 620 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 CDKN2AP42771 156 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 CTXN1P60606 82 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 RAB40BQ12829 278 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 SNTA1Q13424 505 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 CBFBQ13951 182 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 KLHL22Q53GT1 634 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 SLC25A30Q5SVS4 291 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 RPTNQ6XPR3 784 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 MEPCEQ7L2J0 689 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 SSX6Q7RTT6 188 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 KLBQ86Z14 1044 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 SUMF1Q8NBK3 374 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 OR6K6Q8NGW6 343 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 SPRYD4Q8WW59 207 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms