RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SNRPEP62304 92 aaKnown RBP12.14□□□□□ -0.47
MSH6-214ENST00000616033 MESP2Q0VG99 397 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 ZNF805Q5CZA5 627 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 FAM219AQ8IW50 185 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 OR1S1Q8NH92 325 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 MAP3K3Q99759 626 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 PTDSS2Q9BVG9 487 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 LGR4Q9BXB1 951 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 EXO5Q9H790 373 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 SLC22A31A6NKX4 558 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 C4orf47A7E2U8 309 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 PLPP2O43688 288 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 C6P13671 934 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 GTF2F2P13984 249 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 SRMP19623 302 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 AK4P27144 223 aaPredicted RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 BMP8BP34820 402 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 LUMP51884 338 aaPredicted RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 CBFBQ13951 182 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 NNATQ16517 81 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 PRRT3Q5FWE3 981 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 GLDNQ6ZMI3 551 aaPredicted RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 ZNF836Q6ZNA1 936 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 BMP8AQ7Z5Y6 402 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 TPRA1Q86W33 373 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 C10orf53Q8N6V4 93 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 ELP4Q96EB1 424 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 PELI1Q96FA3 418 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 TSSK2Q96PF2 358 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 FARSAQ9Y285 508 aaKnown RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 F5H5P2 479 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 FKTNO75072 461 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 GABRA1P14867 456 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 ZNF3P17036 446 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 PTAFRP25105 342 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 ART1P52961 327 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 RAP2BP61225 183 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 MRM1Q6IN84 353 aaKnown RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 UNQ6126/PRO20091Q6UXV3 157 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 MTSS1LQ765P7 747 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 BPIFCQ8NFQ6 507 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 MRPS24Q96EL2 167 aaKnown RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 HSPA12BQ96MM6 686 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 ADGRL4Q9HBW9 690 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 CLDND1Q9NY35 253 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 ZNF443Q9Y2A4 671 aaPredicted RBP12.13□□□□□ -0.47
MSH6-214ENST00000616033 CA5BQ9Y2D0 317 aa12.13□□□□□ -0.47
MSH6-214ENST00000616033 PCDH8O95206 1070 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 LDOC1O95751 146 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 SLC35G4P0C7Q5 338 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 NRG3P56975 720 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 OR1Q1Q15612 314 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 SCGB2B2Q4G0G5 96 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 MRPL2Q5T653 305 aaKnown RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 ADIPOR2Q86V24 386 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 MUC20Q8N307 709 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 OR51S1Q8NGJ8 323 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 WBP1Q96G27 269 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 TCF7L1Q9HCS4 588 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 CHMP1AQ9HD42 196 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 ASF1BQ9NVP2 202 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 IKZF2Q9UKS7 526 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 FBXO4Q9UKT5 387 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 PLEKHM1Q9Y4G2 1056 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 KIAA1671Q9BY89 1806 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 AIPO00170 330 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 EMC8O43402 210 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 IFNGR1P15260 489 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 PPP3CBP16298 524 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 UGT2B7P16662 529 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 P2RX1P51575 399 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 GMFBP60983 142 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 SIRPAP78324 504 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 NTHL1P78549 312 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 FLI1Q01543 452 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 CCINQ13939 588 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 DECR1Q16698 335 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 B3GNTL1Q67FW5 361 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 ZNF761Q86XN6 746 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 DCUN1D3Q8IWE4 304 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 NKD1Q969G9 470 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 ACSS1Q9NUB1 689 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 PPIL1Q9Y3C6 166 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 IER3IP1Q9Y5U9 82 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 LRIT2A6NDA9 550 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 PRKNO60260 465 aaPredicted RBP12.12□□□□□ -0.47
MSH6-214ENST00000616033 ABLIM3O94929 683 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 NFATC1O95644 943 aa12.12□□□□□ -0.47
MSH6-214ENST00000616033 AKR1C3P42330 323 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms