RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PKDCCQ504Y2 493 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 EXOSC6Q5RKV6 272 aaKnown RBP4.26□□□□□ -1.73
CHD9-221ENST00000615216 CGB2Q6NT52 195 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 B3GNT9Q6UX72 402 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 OR4N4Q8N0Y3 316 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 CYB561A3Q8NBI2 242 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 OR11L1Q8NGX0 322 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 PAQR8Q8TEZ7 354 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 KHSRPQ92945 711 aaKnown RBP eCLIP4.26□□□□□ -1.735e-7■■■■□ 21.7
CHD9-221ENST00000615216 SLC6A18Q96N87 628 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 MKRN2Q9H000 416 aaKnown RBP4.26□□□□□ -1.73
CHD9-221ENST00000615216 DIMT1Q9UNQ2 313 aaKnown RBP4.26□□□□□ -1.73
CHD9-221ENST00000615216 OTOFQ9HC10 1997 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 K7EPK0 472 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 ZNF780AO75290 641 aaPredicted RBP4.26□□□□□ -1.73
CHD9-221ENST00000615216 BMP4P12644 408 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 GDF1P27539 372 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 CD79BP40259 229 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 SCGB2A2Q13296 93 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 ILKQ13418 452 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 DEFB110Q30KQ9 67 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 NXNL2Q5VZ03 156 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 FBXO46Q6PJ61 603 aaPredicted RBP4.26□□□□□ -1.73
CHD9-221ENST00000615216 OPN5Q6U736 354 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 LINC00299Q6ZSB3 139 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 SMIM15Q7Z3B0 74 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 MKXQ8IYA7 352 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 FAM109AQ8N4B1 249 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 FAM71E2Q8N5Q1 922 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 FRMD1Q8N878 549 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 RBMXL1Q96E39 390 aaKnown RBP4.26□□□□□ -1.73
CHD9-221ENST00000615216 HINT2Q9BX68 163 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 PLEK2Q9NYT0 353 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 PRSS21Q9Y6M0 314 aa4.26□□□□□ -1.73
CHD9-221ENST00000615216 MTCL1Q9Y4B5 1905 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 ZFC3H1O60293 1989 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 TRIP12Q14669 1992 aaPredicted RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 TRAV36DV7A0A075B6V5 113 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 TMEM269A0A1B0GVZ9 245 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 BTBD17A6NE02 478 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 NUDT19A8MXV4 375 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 LDB3O75112 727 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SERPINA2P20848 420 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SSR4P51571 173 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 RAB11AP62491 216 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 EXOSC7Q15024 291 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 RPE65Q16518 533 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SLC36A2Q495M3 483 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 RBMS3Q6XE24 437 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 MEX3BQ6ZN04 569 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 ZNF546Q86UE3 836 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 UBXN10Q96LJ8 280 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 OR52A5Q9H2C5 316 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 LIN7BQ9HAP6 207 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 C1GALT1Q9NS00 363 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 GFOD1Q9NXC2 390 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 PSORS1C1Q9UIG5 152 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 ACAD8Q9UKU7 415 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 PRAMEF27A3QJZ7 478 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 MSTNO14793 375 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SMAD6O43541 496 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 SORBS2O94875 1100 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 KCNK2O95069 426 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 FURINP09958 794 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 PSMB10P40306 273 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 PGGT1BP53609 377 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 CATR1Q13166 79 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 BCL7AQ4VC05 210 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 PRAMEF9Q5VWM5 478 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 L3MBTL4Q8NA19 623 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 OR51L1Q8NGJ5 315 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 KCNG3Q8TAE7 436 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 ASB13Q8WXK3 278 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 DNAJA3Q96EY1 480 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 RADILQ96JH8 1075 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 STACQ99469 402 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 KCNJ15Q99712 375 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 RTP3Q9BQQ7 232 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 PBX4Q9BYU1 374 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 LYRM4Q9HD34 91 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 PLCXD1Q9NUJ7 323 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 A3GALT2U3KPV4 340 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 LOC100289279A0A1B0GTE1 492 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 A0A1B0GV50 99 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SLC9B1P1A6NJY1 282 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 CR2P20023 1033 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 POU3F3P20264 500 aaPredicted RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 KITLGP21583 273 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 RRADP55042 308 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 EEF1A2Q05639 463 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 ADGRE4PQ86SQ3 457 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 VRK2Q86Y07 508 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 OR13C2Q8NGS9 318 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 TOE1Q96GM8 510 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 USB1Q9BQ65 265 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 C1orf198Q9H425 327 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 PTRH2Q9Y3E5 179 aaKnown RBP4.25□□□□□ -1.73
CHD9-221ENST00000615216 E9PI62 339 aa4.25□□□□□ -1.73
CHD9-221ENST00000615216 SLC16A6O15403 523 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms