RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 PRSS41Q7RTY9 318 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 GPR155Q7Z3F1 870 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 OR5J2Q8NH18 312 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 OR56B4Q8NH76 319 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 SLC2A12Q8TD20 617 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 NXPE2Q96DL1 559 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 LMF1Q96S06 567 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 C7orf50Q9BRJ6 194 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 LMF2Q9BU23 707 aaKnown RBP8.01□□□□□ -1.13
LIG4-204ENST00000611712 OR10A5Q9H207 317 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 EVA1AQ9H8M9 152 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 POLE3Q9NRF9 147 aa8.01□□□□□ -1.13
LIG4-204ENST00000611712 TSPAN4O14817 238 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SRPX2O60687 465 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 ZNF432O94892 652 aa8□□□□□ -1.13
LIG4-204ENST00000611712 C1QBP02746 253 aa8□□□□□ -1.13
LIG4-204ENST00000611712 NPR2P20594 1047 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ENDOUP21128 410 aaKnown RBP8□□□□□ -1.13
LIG4-204ENST00000611712 FRKP42685 505 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 PCGF3Q3KNV8 242 aa8□□□□□ -1.13
LIG4-204ENST00000611712 KLHL26Q53HC5 615 aa8□□□□□ -1.13
LIG4-204ENST00000611712 GARNL3Q5VVW2 1013 aa8□□□□□ -1.13
LIG4-204ENST00000611712 METTL11BQ5VVY1 283 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ZNF425Q6IV72 752 aa8□□□□□ -1.13
LIG4-204ENST00000611712 APOOLQ6UXV4 268 aa8□□□□□ -1.13
LIG4-204ENST00000611712 MAMDC2Q7Z304 686 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 ZNF595Q8IYB9 648 aa8□□□□□ -1.13
LIG4-204ENST00000611712 OR5H6Q8NGV6 325 aa8□□□□□ -1.13
LIG4-204ENST00000611712 BAHD1Q8TBE0 780 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 ELSPBP1Q96BH3 223 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SLC6A18Q96N87 628 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SIGLEC11Q96RL6 698 aa8□□□□□ -1.13
LIG4-204ENST00000611712 MAP3K3Q99759 626 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ZNF350Q9GZX5 532 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ACOXLQ9NUZ1 547 aa8□□□□□ -1.13
LIG4-204ENST00000611712 NCDNQ9UBB6 729 aa8□□□□□ -1.13
LIG4-204ENST00000611712 NLRC5Q86WI3 1866 aa8□□□□□ -1.13
LIG4-204ENST00000611712 A0A087WV62 115 aa8□□□□□ -1.13
LIG4-204ENST00000611712 TRABD2BA6NFA1 517 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ZSCAN5BA6NJL1 495 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ACOT7O00154 380 aa8□□□□□ -1.13
LIG4-204ENST00000611712 PRKNO60260 465 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 LALBAP00709 142 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ST6GAL1P15907 406 aa8□□□□□ -1.13
LIG4-204ENST00000611712 OR1D4P47884 311 aa8□□□□□ -1.13
LIG4-204ENST00000611712 RFX2P48378 723 aa8□□□□□ -1.13
LIG4-204ENST00000611712 GZMKP49863 264 aa8□□□□□ -1.13
LIG4-204ENST00000611712 MRPS21P82921 87 aaKnown RBP8□□□□□ -1.13
LIG4-204ENST00000611712 DGCR2P98153 550 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SNTA1Q13424 505 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ZNF628Q5EBL2 1059 aa8□□□□□ -1.13
LIG4-204ENST00000611712 RNLSQ5VYX0 342 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SLC6A19Q695T7 634 aa8□□□□□ -1.13
LIG4-204ENST00000611712 DPY19L2P2Q6ZN68 376 aa8□□□□□ -1.13
LIG4-204ENST00000611712 RDH10Q8IZV5 341 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ZNF784Q8NCA9 323 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 MRGPRX1Q96LB2 322 aa8□□□□□ -1.13
LIG4-204ENST00000611712 OR2A5Q96R48 311 aa8□□□□□ -1.13
LIG4-204ENST00000611712 CMKLR1Q99788 373 aa8□□□□□ -1.13
LIG4-204ENST00000611712 PBX4Q9BYU1 374 aa8□□□□□ -1.13
LIG4-204ENST00000611712 PLEKHA1Q9HB21 404 aa8□□□□□ -1.13
LIG4-204ENST00000611712 LRIT1Q9P2V4 623 aa8□□□□□ -1.13
LIG4-204ENST00000611712 CAMK2AQ9UQM7 478 aa8□□□□□ -1.13
LIG4-204ENST00000611712 METTL21EPA6NDL7 271 aa8□□□□□ -1.13
LIG4-204ENST00000611712 CTNSO60931 367 aa8□□□□□ -1.13
LIG4-204ENST00000611712 MSL3P1P0C860 447 aa8□□□□□ -1.13
LIG4-204ENST00000611712 PTH2RP49190 550 aa8□□□□□ -1.13
LIG4-204ENST00000611712 CLDN20P56880 219 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SLC25A35Q3KQZ1 300 aa8□□□□□ -1.13
LIG4-204ENST00000611712 MANEAQ5SRI9 462 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SLC25A30Q5SVS4 291 aa8□□□□□ -1.13
LIG4-204ENST00000611712 FAM69AQ5T7M9 428 aa8□□□□□ -1.13
LIG4-204ENST00000611712 THSD4Q6ZMP0 1018 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ZNF101Q8IZC7 436 aa8□□□□□ -1.13
LIG4-204ENST00000611712 OR51Q1Q8NH59 317 aa8□□□□□ -1.13
LIG4-204ENST00000611712 NT5CQ8TCD5 201 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ELMOD3Q96FG2 381 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ST6GAL2Q96JF0 529 aa8□□□□□ -1.13
LIG4-204ENST00000611712 DHRS1Q96LJ7 313 aa8□□□□□ -1.13
LIG4-204ENST00000611712 INTS14Q96SY0 518 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ARL6Q9H0F7 186 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SEMA6CQ9H3T2 930 aa8□□□□□ -1.13
LIG4-204ENST00000611712 METTL17Q9H7H0 456 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 TRPV4Q9HBA0 871 aa8□□□□□ -1.13
LIG4-204ENST00000611712 CD207Q9UJ71 328 aa8□□□□□ -1.13
LIG4-204ENST00000611712 SIGLEC7Q9Y286 467 aa8□□□□□ -1.13
LIG4-204ENST00000611712 NOP16Q9Y3C1 178 aaKnown RBP8□□□□□ -1.13
LIG4-204ENST00000611712 NOX1Q9Y5S8 564 aa8□□□□□ -1.13
LIG4-204ENST00000611712 ASCC3Q8N3C0 2202 aaKnown RBP8□□□□□ -1.13
LIG4-204ENST00000611712 GIMAP1-GIMAP5A0A087WTJ2 511 aa8□□□□□ -1.13
LIG4-204ENST00000611712 HSFX4A0A1B0GTS1 333 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 HSFX3A0A1B0GWH4 333 aaPredicted RBP8□□□□□ -1.13
LIG4-204ENST00000611712 MEIS3P1A6NDR6 274 aa8□□□□□ -1.13
LIG4-204ENST00000611712 OR2W5A6NFC9 320 aa8□□□□□ -1.13
LIG4-204ENST00000611712 NAP1L6A6NFF2 107 aa8□□□□□ -1.13
LIG4-204ENST00000611712 EFCAB7A8K855 629 aa8□□□□□ -1.13
LIG4-204ENST00000611712 BRINP1O60477 761 aa8□□□□□ -1.13
LIG4-204ENST00000611712 PSMB1P20618 241 aaKnown RBP8□□□□□ -1.13
LIG4-204ENST00000611712 VAMP1P23763 118 aa8□□□□□ -1.13
LIG4-204ENST00000611712 RIDAP52758 137 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms