RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 MAPK11Q15759 364 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 MST1LQ2TV78 715 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 HIKESHIQ53FT3 197 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 TMEM225Q6GV28 225 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 SPATA19Q7Z5L4 167 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 VRK2Q86Y07 508 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 PEX5LQ8IYB4 626 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 ZNF440Q8IYI8 595 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 OR9K2Q8NGE7 335 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 TMEM158Q8WZ71 300 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 PROX1Q92786 737 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 FBXO17Q96EF6 278 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 PAIP2Q9BPZ3 127 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 SF3B5Q9BWJ5 86 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 BEX2Q9BXY8 128 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 CENPHQ9H3R5 247 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 CDC42EP3Q9UKI2 254 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 GPR45Q9Y5Y3 372 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 ARFGEF3Q5TH69 2177 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 AQP7P3A6NL99 342 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 ATP6V1G2-DDX39BF2Z307 99 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 KRT75O95678 551 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 F12P00748 615 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 FAM157CP0CG43 387 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 LSM11P83369 360 aaKnown RBP eCLIP11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 LRRC74AQ0VAA2 488 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 SWI5Q1ZZU3 235 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 C1QTNF12Q5T7M4 302 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 KLHL24Q6TFL4 600 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 ZNF836Q6ZNA1 936 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 GPAT4Q86UL3 456 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 CADM2Q8N3J6 435 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 MREGQ8N565 214 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 POMGNT2Q8NAT1 580 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 OR52P1PQ8NH57 321 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 WDR55Q9H6Y2 383 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 TMEM45AQ9NWC5 275 aa11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 V9GYY5 206 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-219ENST00000608621 CUBNO60494 3623 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 CDHR4A6H8M9 788 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 A8MVM7 634 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 KRT33AO76009 404 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 IGHV4-31P0DP07 118 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 USF1P22415 310 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 EPHA3P29320 983 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 MVDP53602 400 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 COPZ1P61923 177 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 WBP2NLQ6ICG8 309 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 CREB3L2Q70SY1 520 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 ABHD12BQ7Z5M8 362 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 CLIP4Q8N3C7 705 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 BOD1Q96IK1 185 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 ZBTB18Q99592 522 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 TAPBPLQ9BX59 468 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 PIF1Q9H611 641 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 SLC6A13Q9NSD5 602 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 TMEM160Q9NX00 188 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 ADPRHL2Q9NX46 363 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 PRDM4Q9UKN5 801 aa11.68□□□□□ -0.54
POLR2J3-219ENST00000608621 IGHV1-18A0A0C4DH31 117 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 RFXANKO14593 260 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 PHF1O43189 567 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 LMX1BO60663 402 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 CSF3P09919 207 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 TFPTP0C1Z6 253 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 KITP10721 976 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 PRG2P13727 222 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 ETFAP13804 333 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 CRATP43155 626 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 SELENOPP49908 381 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 PDLIM4P50479 330 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 P2RY4P51582 365 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 LGALS3BPQ08380 585 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 TBRG1Q3YBR2 411 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 LIN52Q52LA3 116 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 TNFAIP8L3Q5GJ75 292 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 HHATQ5VTY9 493 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 ARIH2OSQ8N7S6 290 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 GLB1L3Q8NCI6 653 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 OR1K1Q8NGR3 316 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 BCL2L2Q92843 193 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 SORCS2Q96PQ0 1159 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 SLC38A2Q96QD8 506 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 PARD6BQ9BYG5 372 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 SHARPINQ9H0F6 387 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 CALML5Q9NZT1 146 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 P2RX2Q9UBL9 471 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 ZNF232Q9UNY5 417 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 MALRD1Q5VYJ5 2156 aa11.67□□□□□ -0.54
POLR2J3-219ENST00000608621 DSPPQ9NZW4 1301 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 TRPC5OSA6NMA1 111 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 ZNF587BE7ETH6 402 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 NR5A2O00482 541 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 HDAC3O15379 428 aa11.66□□□□□ -0.54
POLR2J3-219ENST00000608621 SLC22A3O75751 556 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms