RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 MMEL1Q495T6 779 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 RUNDC3AQ59EK9 446 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 INTS11Q5TA45 600 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 ULK3Q6PHR2 472 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 AAED1Q7RTV5 226 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 ATG4DQ86TL0 474 aaPredicted RBP12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 DEPDC4Q8N2C3 294 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 DPP10Q8N608 796 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 TMEM99Q8N816 258 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 POMGNT2Q8NAT1 580 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 MFSD8Q8NHS3 518 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 AKAP1Q92667 903 aaKnown RBP eCLIP12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 FBXW5Q969U6 566 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 ANKRD27Q96NW4 1050 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 CGREF1Q99674 301 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 CPPED1Q9BRF8 314 aaPredicted RBP12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 TMEM204Q9BSN7 226 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 TMEM120AQ9BXJ8 343 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 SLC52A3Q9NQ40 469 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 FAIMQ9NVQ4 179 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 TESQ9UGI8 421 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 FLVCR1Q9Y5Y0 555 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 HIVEP1P15822 2718 aa12.73□□□□□ -0.37
PKNOX1-210ENST00000607049 AKAP9Q99996 3911 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 TRBV5-3A0A0A0MS03 114 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 FRS3O43559 492 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 AQP1P29972 269 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 FOXD4Q12950 439 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 BNIP2Q12982 314 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 MFSD13AQ14CX5 517 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 ALG10BQ5I7T1 473 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 NCMAPQ5T1S8 102 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 FAM91A1Q658Y4 838 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 ADAM5Q6NVV9 412 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 KLHL24Q6TFL4 600 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 PRSS57Q6UWY2 283 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 TMEM108Q6UXF1 575 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 DLEU7Q6UYE1 221 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 NET1Q7Z628 596 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 ZNF433Q8N7K0 673 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 LSMEM1Q8N8F7 131 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 OR9K2Q8NGE7 335 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 SLC26A7Q8TE54 656 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 SLC38A4Q969I6 547 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 SLC25A36Q96CQ1 311 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 SLC47A1Q96FL8 570 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 EPYCQ99645 322 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 MGAT4BQ9UQ53 548 aa12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 MAGED1Q9Y5V3 778 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-210ENST00000607049 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 ITPR3Q14573 2671 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 HOXC5Q00444 222 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 BSPH1Q075Z2 132 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 C1DQ13901 141 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 Q5PR19 223 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 PATL1Q86TB9 770 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 C17orf78Q8N4C9 275 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 C1orf162Q8NEQ5 155 aaPredicted RBP12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 RASSF5Q8WWW0 418 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 TRMT61AQ96FX7 289 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 PERPQ96FX8 193 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 SLCO5A1Q9H2Y9 848 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 ALG2Q9H553 416 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 ZNF385DQ9H6B1 395 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 MED4Q9NPJ6 270 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 CHST2Q9Y4C5 530 aa12.71□□□□□ -0.37
PKNOX1-210ENST00000607049 A0A1B0GWA3 101 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 BBIP1A8MTZ0 92 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 FAM171A2A8MVW0 826 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 TMEM229AB2RXF0 380 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 AKAP8O43823 692 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 RAMP1O60894 148 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 WNT11O96014 354 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 NPPAP01160 153 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 ZNF43P17038 809 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 PAX7P23759 505 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 PTAFRP25105 342 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 MPGP29372 298 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 RPS5P46782 204 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 MTPNP58546 118 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 RPS4XP62701 263 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 IL1RL1Q01638 556 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 SWT1Q5T5J6 900 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 FAM69AQ5T7M9 428 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 C6orf89Q6UWU4 347 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 PCYOX1LQ8NBM8 494 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 OR52N5Q8NH56 324 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 GTPBP3Q969Y2 492 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 MUS81Q96NY9 551 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 BDH2Q9BUT1 245 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 GSX2Q9BZM3 304 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 IKZF5Q9H5V7 419 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 FGFR1OP2Q9NVK5 253 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 POU2F3Q9UKI9 436 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 LAMP3Q9UQV4 416 aa12.7□□□□□ -0.38
PKNOX1-210ENST00000607049 B3GALT5Q9Y2C3 310 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms