RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 DSPPQ9NZW4 1301 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 FBN1P35555 2871 aaKnown RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 IGHV4-30-2A0A087WSY4 118 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 A0A0G2JPF8 293 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 AQP7P3A6NL99 342 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 A8MVM7 634 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 HNRNPCL2B2RXH8 293 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 HNRNPCL3B7ZW38 293 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 UBDO15205 165 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 TLX2O43763 284 aaPredicted RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 CD5LO43866 347 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 GPRIN2O60269 458 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 HNRNPCL1O60812 293 aaKnown RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 ANP32DO95626 131 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 TP53P04637 393 aaPredicted RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 BCHEP06276 602 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 HNRNPCL4P0DMR1 293 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 PRG2P13727 222 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 CDH2P19022 906 aaPredicted RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 P2RY4P51582 365 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 POLR2JP52435 117 aaKnown RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 NUDT6P53370 316 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 DSCR9P59020 149 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 PRPS1P60891 318 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 DSTNP60981 165 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 MAGOHP61326 146 aaKnown RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 COPZ1P61923 177 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 SLC25A3Q00325 362 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 LARS2Q15031 903 aaKnown RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 RAB35Q15286 201 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 RGNQ15493 299 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 ZSWIM7Q19AV6 140 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 GTDC1Q4AE62 458 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 RPS26P11Q5JNZ5 115 aaPredicted RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 ZNF544Q6NX49 715 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 MSANTD1Q6ZTZ1 278 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 CREB3L2Q70SY1 520 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 GPAT4Q86UL3 456 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 CADM2Q8N3J6 435 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 POMGNT2Q8NAT1 580 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 HTRA1Q92743 480 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 VPS33AQ96AX1 596 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 AURKBQ96GD4 344 aaPredicted RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 ITCHQ96J02 903 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 OR52B2Q96RD2 323 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 SPATA9Q9BWV2 254 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 RMND5AQ9H871 391 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 ADPRHL2Q9NX46 363 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 THUMPD1Q9NXG2 353 aaKnown RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 ZIM2Q9NZV7 527 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 ZNF443Q9Y2A4 671 aaPredicted RBP6.67□□□□□ -1.34
CUX1-219ENST00000606749 AMDHD2Q9Y303 409 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 PCDHB14Q9Y5E9 798 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 ATP23Q9Y6H3 246 aa6.67□□□□□ -1.34
CUX1-219ENST00000606749 CR1P17927 2039 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 A0A096LNT2 108 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 FAM234BA2RU67 622 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 TMEM247A6NEH6 219 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 ELOA3DA6NLF2 546 aaPredicted RBP6.66□□□□□ -1.34
CUX1-219ENST00000606749 H7C417 338 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 CLIC1O00299 241 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 KLF11O14901 512 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 NPIPB7O75200 414 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 WNT11O96014 354 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 NUDT7P0C024 238 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 NCF2P19878 526 aaPredicted RBP6.66□□□□□ -1.34
CUX1-219ENST00000606749 APOBEC3AP31941 199 aaPredicted RBP6.66□□□□□ -1.34
CUX1-219ENST00000606749 HOXC5Q00444 222 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 LGALS3BPQ08380 585 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 MST1LQ2TV78 715 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 ELOA3BQ3SY89 546 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 HIKESHIQ53FT3 197 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 C6orf10Q5SRN2 563 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 RNF220Q5VTB9 566 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 C1orf140Q5VVS0 124 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 EPGNQ6UW88 154 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 ABHD12BQ7Z5M8 362 aaPredicted RBP6.66□□□□□ -1.34
CUX1-219ENST00000606749 SERPINA11Q86U17 422 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 HIPK1Q86Z02 1210 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 MIER2Q8N344 545 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 ELOA3Q8NG57 546 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 OR9I1Q8NGQ6 314 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 MFSD8Q8NHS3 518 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 STK35Q8TDR2 534 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 GTF2H4Q92759 462 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 BCL2L2Q92843 193 aaPredicted RBP6.66□□□□□ -1.34
CUX1-219ENST00000606749 C3orf49Q96BT1 292 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 TLCD1Q96CP7 247 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 TMEM19Q96HH6 336 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 TAPBPLQ9BX59 468 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 RSPO3Q9BXY4 272 aaPredicted RBP6.66□□□□□ -1.34
CUX1-219ENST00000606749 PAIP1Q9H074 479 aaKnown RBP6.66□□□□□ -1.34
CUX1-219ENST00000606749 HEATR1Q9H583 2144 aaKnown RBP6.66□□□□□ -1.34
CUX1-219ENST00000606749 ARMC7Q9H6L4 198 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 FKRPQ9H9S5 495 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 TMBIM4Q9HC24 238 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 BCL2L10Q9HD36 194 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 A4GALTQ9NPC4 353 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 YAE1D1Q9NRH1 226 aa6.66□□□□□ -1.34
CUX1-219ENST00000606749 TMEM45AQ9NWC5 275 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms