RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 PRKCDQ05655 676 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 RBPJQ06330 500 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 PON3Q15166 354 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 IGFBP7Q16270 282 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 SGCBQ16585 318 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ZNF74Q16587 644 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ZNF239Q16600 458 aaKnown RBP6.88□□□□□ -1.31
MSH6-211ENST00000606499 MICAQ29983 383 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ACSF3Q4G176 576 aaPredicted RBP6.88□□□□□ -1.31
MSH6-211ENST00000606499 FAM69AQ5T7M9 428 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ANKRD34AQ69YU3 496 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ZNF770Q6IQ21 691 aaPredicted RBP6.88□□□□□ -1.31
MSH6-211ENST00000606499 PGBD2Q6P3X8 592 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 C5orf46Q6UWT4 87 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 RPTNQ6XPR3 784 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 TMPPEQ6ZT21 453 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 RRM2BQ7LG56 351 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 DOLPP1Q86YN1 238 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 EPHX4Q8IUS5 362 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 PM20D2Q8IYS1 436 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 PQLC1Q8N2U9 271 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 RPRMLQ8N4K4 120 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 AQP11Q8NBQ7 271 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ICA1LQ8NDH6 482 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 OR13C2Q8NGS9 318 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 MFSD8Q8NHS3 518 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ZNF417Q8TAU3 575 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 FNDC9Q8TBE3 224 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 PIGXQ8TBF5 258 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 OSTF1Q92882 214 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 SGTBQ96EQ0 304 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 CENPNQ96H22 339 aaPredicted RBP6.88□□□□□ -1.31
MSH6-211ENST00000606499 UCN2Q96RP3 112 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 TRIB1Q96RU8 372 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ZNF587Q96SQ5 575 aaPredicted RBP6.88□□□□□ -1.31
MSH6-211ENST00000606499 GPA33Q99795 319 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 KLHL4Q9C0H6 718 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 ALKBH4Q9NXW9 302 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 SH3BGRL2Q9UJC5 107 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 OAZ3Q9UMX2 235 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 FAM215AQ9Y5M1 114 aa6.88□□□□□ -1.31
MSH6-211ENST00000606499 COL12A1Q99715 3063 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 DNAJC13O75165 2243 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 SLC22A20A6NK97 555 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 FIGNL2A6NMB9 653 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 EFCAB9A8MZ26 197 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 PDLIM1O00151 329 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 PRRG2O14669 202 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 KLF4O43474 513 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 OR2T1O43869 369 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 FZD7O75084 574 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 OR7A10O76100 309 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 AQP8O94778 261 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 TGM6O95932 706 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 IGF2P01344 180 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 SAGP10523 405 aaPredicted RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 POU2F1P14859 743 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 ENPP1P22413 925 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 PRKACGP22612 351 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 ACVR2AP27037 513 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 GTF2E2P29084 291 aaKnown RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 GRPRP30550 384 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 NUP107P57740 925 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 RAC3P60763 192 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 RPS3AP61247 264 aaKnown RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 SLC35A1P78382 337 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 OTUD3Q5T2D3 398 aaPredicted RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 PDSS1Q5T2R2 415 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 C1orf185Q5T7R7 199 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 RTL6Q6ICC9 239 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 SHQ1Q6PI26 577 aaKnown RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 Q6ZPB1 254 aaPredicted RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 NCCRP1Q6ZVX7 275 aaPredicted RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 CHMP1BQ7LBR1 199 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 NANOGNBQ7Z5D8 188 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 ZER1Q7Z7L7 766 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 ADGRE4PQ86SQ3 457 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 CCDC103Q8IW40 242 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 RNF113BQ8IZP6 322 aaKnown RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 TMEM99Q8N816 258 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 OR10G2Q8NGC3 310 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 OR5K1Q8NHB7 308 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 ZPLD1Q8TCW7 415 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 GIPC3Q8TF64 312 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 ROBO4Q8WZ75 1007 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 GTPBP3Q969Y2 492 aaKnown RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 CPNE4Q96A23 557 aaPredicted RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 FEVQ99581 238 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 CIB1Q99828 191 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 BDH2Q9BUT1 245 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 TAPBPLQ9BX59 468 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 FKRPQ9H9S5 495 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 TIGARQ9NQ88 270 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 NANSQ9NR45 359 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 PDP1Q9P0J1 537 aaPredicted RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 C6orf203Q9P0P8 240 aaPredicted RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 KLHL13Q9P2N7 655 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 CLCF1Q9UBD9 225 aa6.87□□□□□ -1.31
MSH6-211ENST00000606499 NKX1-2Q9UD57 310 aaPredicted RBP6.87□□□□□ -1.31
MSH6-211ENST00000606499 ZNF229Q9UJW7 825 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms