RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CTSL3PQ5NE16 218 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ACSM2BQ68CK6 577 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM199XQ6PEV8 388 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 HAGHLQ6PII5 290 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PAQR9Q6ZVX9 377 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC16A9Q7RTY1 509 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PIWIL4Q7Z3Z4 852 aaKnown RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PGAM4Q8N0Y7 254 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 CDYL2Q8N8U2 506 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PAPD5Q8NDF8 572 aaKnown RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF431Q8TF32 576 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 C1orf54Q8WWF1 131 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PIGCQ92535 297 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 NPIPB3Q92617 1050 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 GCDHQ92947 438 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PIGTQ969N2 578 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 OTULINQ96BN8 352 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM210BQ96KR6 192 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 RPL10LQ96L21 214 aaKnown RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 MARK4Q96L34 752 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 TMED9Q9BVK6 235 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM49AQ9H0Q0 323 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 GBA2Q9HCG7 927 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ACP6Q9NPH0 428 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 DYRK4Q9NR20 520 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 RNF146Q9NTX7 359 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 RBPJLQ9UBG7 517 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 IKZF3Q9UKT9 509 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ICKQ9UPZ9 632 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PRG3Q9Y2Y8 225 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 CSDC2Q9Y534 153 aaKnown RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 A0A087WV48 116 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 NPIPB5A8MRT5 1133 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 B4DXG7 233 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 TSTD3H0UI37 97 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PDCD5O14737 125 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 AIREO43918 545 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PPP1R11O60927 126 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ITGA10O75578 1167 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 B3GAT3O94766 335 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 CLDN7O95471 211 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 CRHBPP24387 322 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 CA5AP35218 305 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 TGM4P49221 684 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 RPL15P61313 204 aaKnown RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 RRAS2P62070 204 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 QPRTQ15274 297 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 OR8G1Q15617 311 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ATP6AP1Q15904 470 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF750Q32MQ0 723 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF789Q5FWF6 425 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC8B1Q6J4K2 584 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ACSM5Q6NUN0 579 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 B3GLCTQ6Y288 498 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PTAR1Q7Z6K3 402 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 MS4A15Q8N5U1 240 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 AMER2Q8N7J2 671 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM222BQ8WU58 562 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 CLEC4DQ8WXI8 215 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 TRMT61AQ96FX7 289 aaKnown RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 MED8Q96G25 268 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PEX11GQ96HA9 241 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC38A3Q99624 504 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 SDHCQ99643 169 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 ALOXE3Q9BYJ1 711 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 RNF122Q9H9V4 155 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 MOKQ9UQ07 419 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 PPP1R3CQ9UQK1 317 aa4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 TIMM13Q9Y5L4 95 aaPredicted RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 YLPM1P49750 1951 aaKnown RBP4.6□□□□□ -1.67
SPTBN1-206ENST00000602898 TRAV26-1A0A087WT03 109 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TCRBV3S1A0A5B6 114 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 OR2W5A6NFC9 320 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 DUXAA6NLW8 204 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CLDN24A6NM45 220 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 C17orf100A8MU93 164 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MKRN2OSH3BPM6 223 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MYL12BO14950 172 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 FLRT2O43155 660 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 OR1F1O43749 312 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 OR10H2O60403 315 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MOSPD3O75425 235 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 OR6A2O95222 327 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ACTL6AO96019 429 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 APOC3P02656 99 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MYL12AP19105 171 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 PMCHP20382 165 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 COMTP21964 271 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 S100A11P31949 105 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MAS1LP35410 378 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 WNT3AP56704 352 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MS4A2Q01362 244 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 EGR4Q05215 589 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ELAVL2Q12926 359 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 C5orf47Q569G3 176 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 NHLRC3Q5JS37 347 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 RHBDD2Q6NTF9 364 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CCDC190Q86UF4 302 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 KMT5CQ86Y97 462 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms