RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 YAE1D1Q9NRH1 226 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 TMEM120BA0PK00 339 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 AQP7P3A6NL99 342 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 H7C417 338 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 KITP10721 976 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 ETFAP13804 333 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 CRATP43155 626 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 COPZ1P61923 177 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 SLC25A3Q00325 362 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 ZSWIM7Q19AV6 140 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 NXNQ6DKJ4 435 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 TMEM225Q6GV28 225 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 CLEC2AQ6UVW9 174 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 ZNF836Q6ZNA1 936 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 HIPK1Q86Z02 1210 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 CADM2Q8N3J6 435 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 SLC38A5Q8WUX1 472 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 ZNF385AQ96PM9 386 aaKnown RBP14.88□□□□□ -0.03
SCAF1-204ENST00000601038 RMND5AQ9H871 391 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 TPT1P8Q9HAU6 139 aa14.88□□□□□ -0.03
SCAF1-204ENST00000601038 THUMPD1Q9NXG2 353 aaKnown RBP14.88□□□□□ -0.03
SCAF1-204ENST00000601038 A0A096LNT2 108 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 FAM234BA2RU67 622 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ELOA3DA6NLF2 546 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-204ENST00000601038 A8MVM7 634 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 GPRIN2O60269 458 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ANP32DO95626 131 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 WNT11O96014 354 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 BCHEP06276 602 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 BMP4P12644 408 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 APOBEC3AP31941 199 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-204ENST00000601038 SLC18A1P54219 525 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 DSTNP60981 165 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 BNIP2Q12982 314 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 LARS2Q15031 903 aaKnown RBP14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ELOA3BQ3SY89 546 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 RNF220Q5VTB9 566 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ATG16L1Q676U5 607 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 MSANTD1Q6ZTZ1 278 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ABHD12BQ7Z5M8 362 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-204ENST00000601038 GPAT4Q86UL3 456 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 CLIP4Q8N3C7 705 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ELOA3Q8NG57 546 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ITCHQ96J02 903 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 TAPBPLQ9BX59 468 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ARMC7Q9H6L4 198 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 SDR39U1Q9NRG7 319 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ZIM2Q9NZV7 527 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ZNF232Q9UNY5 417 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ZNF443Q9Y2A4 671 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-204ENST00000601038 ATP23Q9Y6H3 246 aa14.87□□□□□ -0.03
SCAF1-204ENST00000601038 A0A096LPI6 279 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 A0A0G2JPF8 293 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 A8MV72 311 aaPredicted RBP14.86□□□□□ -0.03
SCAF1-204ENST00000601038 HNRNPCL2B2RXH8 293 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 HNRNPCL3B7ZW38 293 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 HNRNPCL1O60812 293 aaKnown RBP14.86□□□□□ -0.03
SCAF1-204ENST00000601038 VAMP5O95183 116 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 HNRNPCL4P0DMR1 293 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 P2RY4P51582 365 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 CHRNB3Q05901 458 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 SLC9B1Q4ZJI4 515 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 KLHL24Q6TFL4 600 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 MGARPQ8TDB4 240 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 HTRA1Q92743 480 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 AURKBQ96GD4 344 aaPredicted RBP14.86□□□□□ -0.03
SCAF1-204ENST00000601038 TNFRSF13CQ96RJ3 184 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 MANSC1Q9H8J5 431 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 OBP2BQ9NPH6 170 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 TMEM45AQ9NWC5 275 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 ADPRHL2Q9NX46 363 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 CHST2Q9Y4C5 530 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 PMF1-BGLAPU3KQ54 211 aa14.86□□□□□ -0.03
SCAF1-204ENST00000601038 TMEM247A6NEH6 219 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 UBDO15205 165 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 FRS3O43559 492 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 NPIPB7O75200 414 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 KRT33AO76009 404 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 IFNA2P01563 188 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 PRG2P13727 222 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 SLC25A16P16260 332 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 CDH2P19022 906 aaPredicted RBP14.85□□□□□ -0.03
SCAF1-204ENST00000601038 NCF2P19878 526 aaPredicted RBP14.85□□□□□ -0.03
SCAF1-204ENST00000601038 PAX7P23759 505 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 POLR2JP52435 117 aaKnown RBP14.85□□□□□ -0.03
SCAF1-204ENST00000601038 EFNA4P52798 201 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 LOXL1Q08397 574 aaPredicted RBP14.85□□□□□ -0.03
SCAF1-204ENST00000601038 GTDC1Q4AE62 458 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 C1orf140Q5VVS0 124 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 HMBOX1Q6NT76 420 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 PODNL1Q6PEZ8 512 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 CREB3L2Q70SY1 520 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 ZNF525Q8N782 197 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 FAM168AQ92567 244 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 TMEM19Q96HH6 336 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 SPATA9Q9BWV2 254 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 CACYBPQ9HB71 228 aaKnown RBP14.85□□□□□ -0.03
SCAF1-204ENST00000601038 IFT52Q9Y366 437 aa14.85□□□□□ -0.03
SCAF1-204ENST00000601038 OR6C65A6NJZ3 312 aa14.84□□□□□ -0.03
SCAF1-204ENST00000601038 ATP6V1G2-DDX39BF2Z307 99 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms