RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 RAP2CQ9Y3L5 183 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 OR6C65A6NJZ3 312 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 LIPT2A6NK58 231 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 AQP7P3A6NL99 342 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 B9A039 149 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 KRT33AO76009 404 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 VAMP5O95183 116 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 SERPINE1P05121 402 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 C8BP07358 591 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 CHRM4P08173 479 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 S100A3P33764 101 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 SERPINF1P36955 418 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 CEACAM7Q14002 265 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 SYPL1Q16563 259 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 C3orf36Q3SXR2 165 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 FAM174BQ3ZCQ3 159 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 HIKESHIQ53FT3 197 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 MRPL2Q5T653 305 aaKnown RBP18.45■□□□□ 0.54
PNKP-212ENST00000599454 SLC46A3Q7Z3Q1 461 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 MSI2Q96DH6 328 aaKnown RBP18.45■□□□□ 0.54
PNKP-212ENST00000599454 SLC38A2Q96QD8 506 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 CHODLQ9H9P2 273 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 CA10Q9NS85 328 aa18.45■□□□□ 0.54
PNKP-212ENST00000599454 IGHV1-18A0A0C4DH31 117 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 ZNF587BE7ETH6 402 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 ITM2AO43736 263 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 AKR7A3O95154 331 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 CRYAAP02489 173 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 CREB1P16220 341 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 LBPP18428 481 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 CDH2P19022 906 aaPredicted RBP18.44■□□□□ 0.54
PNKP-212ENST00000599454 CXCR1P25024 350 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 RPL14P50914 215 aaKnown RBP18.44■□□□□ 0.54
PNKP-212ENST00000599454 UBE2NP61088 152 aaKnown RBP18.44■□□□□ 0.54
PNKP-212ENST00000599454 ABCE1P61221 599 aaKnown RBP18.44■□□□□ 0.54
PNKP-212ENST00000599454 LRRC74AQ0VAA2 488 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 SQLEQ14534 574 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 OR7A5Q15622 319 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 EFNB3Q15768 340 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 TBRG1Q3YBR2 411 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 PEX5LQ8IYB4 626 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 OR1K1Q8NGR3 316 aa18.44■□□□□ 0.54
PNKP-212ENST00000599454 AURKBQ96GD4 344 aaPredicted RBP18.44■□□□□ 0.54
PNKP-212ENST00000599454 ZNF385AQ96PM9 386 aaKnown RBP18.44■□□□□ 0.54
PNKP-212ENST00000599454 ARPC4-TTLL3A0A0A6YYG9 625 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 IGHV4-61A0A0C4DH41 118 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 SLC35F4A4IF30 521 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 CCDC154A6NI56 674 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 KLF11O14901 512 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 BIRC5O15392 142 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 ZNF23P17027 643 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 PPOXP50336 477 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 CHI3L2Q15782 390 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 TMEM225Q6GV28 225 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 GPAT4Q86UL3 456 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 MAGEE2Q8TD90 523 aaPredicted RBP18.43■□□□□ 0.54
PNKP-212ENST00000599454 FOXN4Q96NZ1 517 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 PANX1Q96RD7 426 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 VRK1Q99986 396 aaPredicted RBP18.43■□□□□ 0.54
PNKP-212ENST00000599454 TAPBPLQ9BX59 468 aa18.43■□□□□ 0.54
PNKP-212ENST00000599454 CRNNQ9UBG3 495 aaPredicted RBP18.43■□□□□ 0.54
PNKP-212ENST00000599454 A8MVM7 634 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 NR2F1P10589 423 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 HOXB1P14653 301 aaPredicted RBP18.42■□□□□ 0.54
PNKP-212ENST00000599454 CARTPTQ16568 116 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 ZSWIM7Q19AV6 140 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 IQCCQ4KMZ1 466 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 WBP2NLQ6ICG8 309 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 OGFOD2Q6N063 350 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 SPATA19Q7Z5L4 167 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 FAM169BQ8N8A8 192 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 OR4F15Q8NGB8 312 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 C3orf49Q96BT1 292 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 PKNOX2Q96KN3 472 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 RAB1BQ9H0U4 201 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 PLK3Q9H4B4 646 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 HAO1Q9UJM8 370 aa18.42■□□□□ 0.54
PNKP-212ENST00000599454 A0A096LPI6 279 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 CDHR4A6H8M9 788 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 HAX1O00165 279 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 LGI1O95970 557 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 P2RY4P51582 365 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 SH3BGRP55822 239 aaPredicted RBP18.41■□□□□ 0.54
PNKP-212ENST00000599454 COPZ1P61923 177 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 NAAAQ02083 359 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 LIPNQ5VXI9 398 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 IL17RELQ6ZVW7 336 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 BCL2L2Q92843 193 aaPredicted RBP18.41■□□□□ 0.54
PNKP-212ENST00000599454 ADPRHL2Q9NX46 363 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 RASD1Q9Y272 281 aa18.41■□□□□ 0.54
PNKP-212ENST00000599454 WDR91A4D1P6 747 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 KRT75O95678 551 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 TGFAP01135 160 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 C1QCP02747 245 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 OR4A8P0C604 315 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 SLC1A6P48664 564 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 SELENOPP49908 381 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 IDH3GP51553 393 aaPredicted RBP18.4■□□□□ 0.54
PNKP-212ENST00000599454 ADIPOQQ15848 244 aa18.4■□□□□ 0.54
PNKP-212ENST00000599454 LIN52Q52LA3 116 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms