RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 RHNO1Q9BSD3 238 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 TRIM15Q9C019 465 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 DENND2DQ9H6A0 471 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ADPRHL2Q9NX46 363 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF232Q9UNY5 417 aa12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 SAMD4AQ9UPU9 718 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF443Q9Y2A4 671 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-218ENST00000598907 A0A096LNT2 108 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 CDHR4A6H8M9 788 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 PRAMEF25A6NGN4 478 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 SERINC4A6NH21 518 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 CLDN24A6NM45 220 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 SCDO00767 359 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 LMX1BO60663 402 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 PRKD3O94806 890 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 SNX4O95219 450 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 STAMBPO95630 424 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 LGI1O95970 557 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 SEMG1P04279 462 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 FESP07332 822 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 UMPSP11172 480 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 RPP38P78345 283 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 VLDLRP98155 873 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 KPNB1Q14974 876 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 LARS2Q15031 903 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 CD226Q15762 336 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 FAM86B1Q8N7N1 296 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF610Q8N9Z0 462 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 SMYD1Q8NB12 490 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 FAM71CQ8NEG0 241 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 OR1J4Q8NGS1 313 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 NEUROG1Q92886 237 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 FBXW5Q969U6 566 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 PYURFQ96I23 114 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 LRGUKQ96M69 825 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 ESRP2Q9H6T0 727 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 EVA1AQ9H8M9 152 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 BAG5Q9UL15 447 aa12.37□□□□□ -0.43
SHKBP1-218ENST00000598907 IGLV3-32A0A0A0MS00 114 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 C2orf72A6NCS6 295 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 BCAS1O75363 584 aaPredicted RBP12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 ANGPTL1O95841 491 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 CHMP24386 653 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 PCYT1AP49585 367 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 NRF1Q16656 503 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 FAM120AOSQ5T036 256 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 MRPL2Q5T653 305 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 TIGD3Q6B0B8 471 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 SLC30A6Q6NXT4 461 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 VTCN1Q7Z7D3 282 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 MARCH3Q86UD3 253 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 MISPQ8IVT2 679 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 ADGRG5Q8IZF4 528 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 LZICQ8WZA0 190 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 SLC35B4Q969S0 331 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 HSH2DQ96JZ2 352 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 UCN2Q96RP3 112 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 ARHGDIGQ99819 225 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 WFDC6Q9BQY6 131 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 TMEM204Q9BSN7 226 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 RLIMQ9NVW2 624 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 SLC35A3Q9Y2D2 325 aa12.36□□□□□ -0.43
SHKBP1-218ENST00000598907 SLC22A20A6NK97 555 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 H3BNH8 94 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 NDUFB5O43674 189 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 EIF4E2O60573 245 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF682O95780 498 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 GPIP06744 558 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 HPGDP15428 266 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 ITGA2P17301 1181 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 KIR2DL2P43627 348 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 CLK3P49761 638 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 C17orf67Q0P5P2 114 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 IQCCQ4KMZ1 466 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 CYB5R2Q6BCY4 276 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 OR2A2Q6IF42 318 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 TSEN54Q7Z6J9 526 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 SPATA24Q86W54 205 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 UBQLNLQ8IYU4 475 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 PAPD5Q8NDF8 572 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 OR4D11Q8NGI4 311 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 SMAP2Q8WU79 429 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 CNOT9Q92600 299 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 SLCO4A1Q96BD0 722 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 TMEM41AQ96HV5 264 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 TPD52L3Q96J77 140 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 C7orf34Q96L11 122 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 OSBPL11Q9BXB4 747 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 TBL1XR1Q9BZK7 514 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 LAT2Q9GZY6 243 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 ARMC7Q9H6L4 198 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 MAGIXQ9H6Y5 334 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 METTL7AQ9H8H3 244 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 CACYBPQ9HB71 228 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 BARX1Q9HBU1 254 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 GALNT9Q9HCQ5 603 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 EXOSC3Q9NQT5 275 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms