RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PGAM4Q8N0Y7 254 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 CIARTQ8N365 385 aaPredicted RBP12.15□□□□□ -0.46
SCAF1-203ENST00000598359 HSD17B8Q92506 261 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 DDIT4LQ96D03 193 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 PIP5K1AQ99755 562 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 RSPO3Q9BXY4 272 aaPredicted RBP12.15□□□□□ -0.46
SCAF1-203ENST00000598359 ADAM19Q9H013 955 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 CCDC167Q9P0B6 97 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 EMC3Q9P0I2 261 aa12.15□□□□□ -0.46
SCAF1-203ENST00000598359 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 A0A096LPI6 279 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 LOC100653049A0A140TA62 436 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 A0A1W2PR80 420 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 DPRXA6NFQ7 191 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 BBIP1A8MTZ0 92 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 FAAHO00519 579 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF208O43345 1280 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 ENTPD5O75356 428 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 KRT34O76011 436 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 MAGEA8P43361 318 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 CLK1P49759 484 aaKnown RBP12.14□□□□□ -0.47
SCAF1-203ENST00000598359 BSPH1Q075Z2 132 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 CEACAM7Q14002 265 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 PDK3Q15120 406 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 AGKQ53H12 422 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 NCMAPQ5T1S8 102 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 C9orf135Q5VTT2 229 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 SHEQ5VZ18 495 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 BLOC1S3Q6QNY0 202 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 SERPINA11Q86U17 422 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 DEFB107AQ8IZN7 70 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF433Q8N7K0 673 aaPredicted RBP12.14□□□□□ -0.47
SCAF1-203ENST00000598359 KBTBD8Q8NFY9 601 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 PIGXQ8TBF5 258 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 TSPEARQ8WU66 669 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 IGFBPL1Q8WX77 278 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 PMM1Q92871 262 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 APH1AQ96BI3 265 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 RCN3Q96D15 328 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 SPDL1Q96EA4 605 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 Q96MF0 132 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
SCAF1-203ENST00000598359 POTEKPQ9BYX7 375 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 EFCAB1Q9HAE3 211 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 SLC52A3Q9NQ40 469 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 NPAP1Q9NZP6 1156 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 CALML5Q9NZT1 146 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 TRAPPC4Q9Y296 219 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 RNF115Q9Y4L5 304 aa12.14□□□□□ -0.47
SCAF1-203ENST00000598359 NSD1Q96L73 2696 aaPredicted RBP12.14□□□□□ -0.47
SCAF1-203ENST00000598359 CSPG4Q6UVK1 2322 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 A0A0G2JPF8 293 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 TRIM64A6NGJ6 449 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 TRIM64BA6NI03 449 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 HNRNPCL2B2RXH8 293 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 HNRNPCL3B7ZW38 293 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 ARHGEF9O43307 516 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 RAD51DO75771 328 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 AKR7A3O95154 331 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 CD3EP07766 207 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 HNRNPCL4P0DMR1 293 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 UQCRBP14927 111 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 COX5AP20674 150 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 CXCR1P25024 350 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 PTH2RP49190 550 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 NUDT2P50583 147 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 SLC16A1P53985 500 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 SLC35A1P78382 337 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 H3F3AP84243 136 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 FAPQ12884 760 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 LARS2Q15031 903 aaKnown RBP12.13□□□□□ -0.47
SCAF1-203ENST00000598359 PPA1Q15181 289 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 OR7A5Q15622 319 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF311Q5JNZ3 666 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 RNF220Q5VTB9 566 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 FBXW9Q5XUX1 488 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 ADAM5Q6NVV9 412 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 C8orf82Q6P1X6 216 aaPredicted RBP12.13□□□□□ -0.47
SCAF1-203ENST00000598359 CASP12Q6UXS9 341 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 COMTD1Q86VU5 262 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF440Q8IYI8 595 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 LRRC75A-AS1Q8N1F1 130 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 TMEM99Q8N816 258 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF611Q8N823 705 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 OR52E4Q8NGH9 312 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 NFKBIDQ8NI38 313 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 TMEM171Q8WVE6 324 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 C18orf12Q96KH6 178 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 SPATA9Q9BWV2 254 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 IKZF5Q9H5V7 419 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 A4GALTQ9NPC4 353 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 LAMP3Q9UQV4 416 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 FLVCR1Q9Y5Y0 555 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 DSCAMO60469 2012 aa12.13□□□□□ -0.47
SCAF1-203ENST00000598359 TMEM247A6NEH6 219 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 LIPT2A6NK58 231 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 H7C1Q1 480 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 GPR171O14626 319 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 SMAD7O15105 426 aaKnown RBP12.12□□□□□ -0.47
SCAF1-203ENST00000598359 DNPH1O43598 174 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms