RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TMEM99Q8N816 258 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 LSMEM1Q8N8F7 131 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 PIGXQ8TBF5 258 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 STK35Q8TDR2 534 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 LZICQ8WZA0 190 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 KTI12Q96EK9 354 aaPredicted RBP9.87□□□□□ -0.83
LIG1-211ENST00000596457 PSD2Q9BQI7 771 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 KLHL4Q9C0H6 718 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 ENKD1Q9H0I2 346 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 SLC24A3Q9HC58 644 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 PLSCR4Q9NRQ2 329 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 ABCD2Q9UBJ2 740 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 FOXD3Q9UJU5 478 aaPredicted RBP9.87□□□□□ -0.83
LIG1-211ENST00000596457 PRDM4Q9UKN5 801 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 SLC7A7Q9UM01 511 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 TRAPPC4Q9Y296 219 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 PDZD2O15018 2839 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 A0A0B4J2E0 115 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 A0A1B0GX12 115 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 TRAPPC13A5PLN9 417 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 LIPT2A6NK58 231 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 EIF1BO60739 113 aaKnown RBP9.86□□□□□ -0.83
LIG1-211ENST00000596457 CD8BP10966 210 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 SSTR2P30874 369 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 CD79BP40259 229 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 KIR2DL3P43628 341 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 YAP1P46937 504 aaKnown RBP9.86□□□□□ -0.83
LIG1-211ENST00000596457 MNAT1P51948 309 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 EGR4Q05215 589 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 GUSBP1Q15486 140 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 ANKRD34AQ69YU3 496 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 TMEM225Q6GV28 225 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 TTC33Q6PID6 262 aaPredicted RBP9.86□□□□□ -0.83
LIG1-211ENST00000596457 RINLQ6ZS11 566 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 VTCN1Q7Z7D3 282 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 GPAT4Q86UL3 456 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 STK32CQ86UX6 486 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 ZNF100Q8IYN0 542 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 ADAMTS16Q8TE57 1224 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 SLC38A4Q969I6 547 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 TAAR8Q969N4 342 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 C14orf79Q96F83 325 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 SLC41A3Q96GZ6 507 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 C12orf10Q9HB07 376 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 NDE1Q9NXR1 346 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 NOSIPQ9Y314 301 aaKnown RBP9.86□□□□□ -0.83
LIG1-211ENST00000596457 DNHD1Q96M86 4753 aa9.86□□□□□ -0.83
LIG1-211ENST00000596457 CSMD1Q96PZ7 3565 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 TRAV36DV7A0A075B6V5 113 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 A0A087WUJ7 227 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 TUBAL3A6NHL2 446 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 KPNA4O00629 521 aaPredicted RBP9.85□□□□□ -0.83
LIG1-211ENST00000596457 CHP2O43745 196 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 FMO6PO60774 539 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 GGT1P19440 569 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 PIN1Q13526 163 aaPredicted RBP9.85□□□□□ -0.83
LIG1-211ENST00000596457 FBXL19-AS1Q494R0 122 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 SAMD4BQ5PRF9 694 aaKnown RBP9.85□□□□□ -0.83
LIG1-211ENST00000596457 ABLIM2Q6H8Q1 611 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 ZNF613Q6PF04 617 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 BEND4Q6ZU67 534 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 CBLL1Q75N03 491 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 GALNT5Q7Z7M9 940 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 TSPYL5Q86VY4 417 aaPredicted RBP9.85□□□□□ -0.83
LIG1-211ENST00000596457 UBE2J2Q8N2K1 259 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 KDM8Q8N371 416 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 ACBD4Q8NC06 268 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 RBM15BQ8NDT2 890 aaKnown RBP9.85□□□□□ -0.83
LIG1-211ENST00000596457 ZC3HAV1LQ96H79 300 aaKnown RBP9.85□□□□□ -0.83
LIG1-211ENST00000596457 HSH2DQ96JZ2 352 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 TACO1Q9BSH4 297 aaKnown RBP9.85□□□□□ -0.83
LIG1-211ENST00000596457 BCO1Q9HAY6 547 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 EMC3Q9P0I2 261 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 RHCGQ9UBD6 479 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 PRSS50Q9UI38 385 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 ING1Q9UK53 422 aaPredicted RBP9.85□□□□□ -0.83
LIG1-211ENST00000596457 V9GYQ6 96 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 NAV3Q8IVL0 2385 aa9.85□□□□□ -0.83
LIG1-211ENST00000596457 IGKV1D-42A0A075B6H8 117 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 ZNF716A6NP11 495 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 ZNF724A8MTY0 619 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 LRRN3E7EW58 273 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 J3KTA2 159 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 DNPH1O43598 174 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 OR2T1O43869 369 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 NPIPB7O75200 414 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 ADAP00813 363 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 IGHV3-9P01782 118 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 THY1P04216 161 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 PRF1P14222 555 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 IGFBP2P18065 325 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 CALB2P22676 271 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 GRPRP30550 384 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 TLE4Q04727 773 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 TSC22D1Q15714 1073 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 IFI44LQ53G44 452 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 FBXW10Q5XX13 1052 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 ALKBH2Q6NS38 261 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 PAQR6Q6TCH4 344 aa9.84□□□□□ -0.83
LIG1-211ENST00000596457 C6orf89Q6UWU4 347 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms