RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 FXYD1O00168 92 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 TPST2O60704 377 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 MRPL33O75394 65 aaKnown RBP11.52□□□□□ -0.57
USE1-207ENST00000596136 AKR7A3O95154 331 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 LGI1O95970 557 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 C8BP07358 591 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 MDH1P40925 334 aaKnown RBP11.52□□□□□ -0.57
USE1-207ENST00000596136 CYLC2Q14093 348 aaPredicted RBP11.52□□□□□ -0.57
USE1-207ENST00000596136 OR7A5Q15622 319 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 TRMT5Q32P41 509 aaKnown RBP11.52□□□□□ -0.57
USE1-207ENST00000596136 TIMM23BQ5SRD1 257 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 OTUD3Q5T2D3 398 aaPredicted RBP11.52□□□□□ -0.57
USE1-207ENST00000596136 FAM91A1Q658Y4 838 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 NANOGP8Q6NSW7 305 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 ADAM5Q6NVV9 412 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 C5orf46Q6UWT4 87 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 C20orf204Q6ZNR8 217 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 ARMC8Q8IUR7 673 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 DNAJA4Q8WW22 397 aaPredicted RBP11.52□□□□□ -0.57
USE1-207ENST00000596136 SLC38A4Q969I6 547 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 PLPPR2Q96GM1 343 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 WFDC6Q9BQY6 131 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 PTDSS2Q9BVG9 487 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 TAPBPLQ9BX59 468 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 NANOGQ9H9S0 305 aa11.52□□□□□ -0.57
USE1-207ENST00000596136 TESQ9UGI8 421 aaKnown RBP11.52□□□□□ -0.57
USE1-207ENST00000596136 BBIP1A8MTZ0 92 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 M0QX08 132 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 SLC22A2O15244 555 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 FMO6PO60774 539 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 LYZL6O75951 148 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 PNMTP11086 282 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 AQP1P29972 269 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 HOXC12P31275 282 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 NRF1Q16656 503 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 DUSP7Q16829 419 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 CYP51A1Q16850 503 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 NCMAPQ5T1S8 102 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 ULK3Q6PHR2 472 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 CCDC80Q76M96 950 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.51□□□□□ -0.57
USE1-207ENST00000596136 PATL1Q86TB9 770 aaKnown RBP11.51□□□□□ -0.57
USE1-207ENST00000596136 CALHM3Q86XJ0 350 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 WFDC8Q8IUA0 241 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 TGIF2LYQ8IUE0 185 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 GPR32P1Q8NGA4 272 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 OR9K2Q8NGE7 335 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 OR8J3Q8NGG0 315 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 OR52E4Q8NGH9 312 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 OR6S1Q8NH40 331 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 OR10A6Q8NH74 314 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 C10orf82Q8WW14 230 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 PIGTQ969N2 578 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 LRRC58Q96CX6 371 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 KTI12Q96EK9 354 aaPredicted RBP11.51□□□□□ -0.57
USE1-207ENST00000596136 BOD1Q96IK1 185 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 MUS81Q96NY9 551 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 ARHGDIGQ99819 225 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 SH3GL1Q99961 368 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 TMUB1Q9BVT8 246 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 AMBRA1Q9C0C7 1298 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 NGBQ9NPG2 151 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 ASB6Q9NWX5 421 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 RPS6KB2Q9UBS0 482 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 RASD1Q9Y272 281 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 ALPK2Q86TB3 2170 aa11.51□□□□□ -0.57
USE1-207ENST00000596136 FLNAP21333 2647 aaKnown RBP11.51□□□□□ -0.57
USE1-207ENST00000596136 IGKV1D-42A0A075B6H8 117 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 A0A087WUJ7 227 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 A0A0B4J2E0 115 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 A0A1B0GX12 115 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 OR5H1A6NKK0 313 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 ELOA3DA6NLF2 546 aaPredicted RBP11.5□□□□□ -0.57
USE1-207ENST00000596136 OR2T1O43869 369 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 AHSA1O95433 338 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 PLAUP00749 431 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 GGT1P19440 569 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 PCGF2P35227 344 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 RGS8P57771 180 aaPredicted RBP11.5□□□□□ -0.57
USE1-207ENST00000596136 CAPRIN1Q14444 709 aaKnown RBP11.5□□□□□ -0.57
USE1-207ENST00000596136 MAPRE2Q15555 327 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 OR1Q1Q15612 314 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 VMACQ2NL98 169 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 ELOA3BQ3SY89 546 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 ALG10BQ5I7T1 473 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 SWT1Q5T5J6 900 aaKnown RBP11.5□□□□□ -0.57
USE1-207ENST00000596136 C1QTNF12Q5T7M4 302 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 LINC00114Q6XXX2 140 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 ZNF704Q6ZNC4 412 aaPredicted RBP11.5□□□□□ -0.57
USE1-207ENST00000596136 CREB3L2Q70SY1 520 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 LRRC75A-AS1Q8N1F1 130 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 ELOA3Q8NG57 546 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 SLC47A1Q96FL8 570 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 ZNF385AQ96PM9 386 aaKnown RBP11.5□□□□□ -0.57
USE1-207ENST00000596136 PRR14Q9BWN1 585 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 SLC7A10Q9NS82 523 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 ADPRHL2Q9NX46 363 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 TAS2R16Q9NYV7 291 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 PLCE1Q9P212 2302 aa11.5□□□□□ -0.57
USE1-207ENST00000596136 LOC102725191A0A1B0GVB3 256 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms