RNA–Protein interactions for RNA: ENST00000594942.5

SOX2-OT-221, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 675 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-221ENST00000594942 VRK2Q86Y07 508 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 TMEM99Q8N816 258 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 ZIC4Q8N9L1 334 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 POMGNT2Q8NAT1 580 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 ELOA3Q8NG57 546 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 OR9K2Q8NGE7 335 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 OR52P1PQ8NH57 321 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 SLC35B4Q969S0 331 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 FKRPQ9H9S5 495 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 TPT1P8Q9HAU6 139 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 SDR39U1Q9NRG7 319 aaPredicted RBP10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 SLC6A13Q9NSD5 602 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 RLIMQ9NVW2 624 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 ZNF443Q9Y2A4 671 aaPredicted RBP10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 MXRA5Q9NR99 2828 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 RTTNQ86VV8 2226 aa10.92□□□□□ -0.66
SOX2-OT-221ENST00000594942 IGHV4-30-2A0A087WSY4 118 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 A0A096LPI6 279 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 A0A0G2JPF8 293 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 A8MVM7 634 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 TMEM229AB2RXF0 380 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 HNRNPCL2B2RXH8 293 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 HNRNPCL3B7ZW38 293 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 FRS3O43559 492 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 HNRNPCL1O60812 293 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 NPIPB7O75200 414 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 VAMP5O95183 116 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 WNT11O96014 354 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 GKN3PP0CG01 181 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 HNRNPCL4P0DMR1 293 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 ETFAP13804 333 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 PTNP21246 168 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 NUDT6P53370 316 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 COPZ1P61923 177 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 LARS2Q15031 903 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 OR7A5Q15622 319 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 SLC9B1Q4ZJI4 515 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 PRAMEF8Q5VWM4 474 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 PRAMEF7Q5VXH5 474 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 CLEC2AQ6UVW9 174 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 CXXC5Q7LFL8 322 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 ABHD12BQ7Z5M8 362 aaPredicted RBP10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 HIPK1Q86Z02 1210 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 SPATA3Q8NHX4 192 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 STK35Q8TDR2 534 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 SLC38A5Q8WUX1 472 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 ITCHQ96J02 903 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 ZNF385AQ96PM9 386 aaKnown RBP10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 SPATA9Q9BWV2 254 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 RMND5AQ9H871 391 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 OBP2BQ9NPH6 170 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 IFT52Q9Y366 437 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 CHST2Q9Y4C5 530 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 ANK2Q01484 3957 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 SVEP1Q4LDE5 3571 aa10.91□□□□□ -0.66
SOX2-OT-221ENST00000594942 ARFGEF3Q5TH69 2177 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 FAM234BA2RU67 622 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 OR6C65A6NJZ3 312 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 FZD7O75084 574 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 AKR7A3O95154 331 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 ANP32DO95626 131 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 BCHEP06276 602 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 KITP10721 976 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 SLC25A16P16260 332 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 APOBEC3AP31941 199 aaPredicted RBP10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 CRATP43155 626 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 MRPL19P49406 292 aaKnown RBP10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 PRPS1P60891 318 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 LOXL1Q08397 574 aaPredicted RBP10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 RAB35Q15286 201 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 C9orf135Q5VTT2 229 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 NXNQ6DKJ4 435 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 AAED1Q7RTV5 226 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 MAVSQ7Z434 540 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 C3orf49Q96BT1 292 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 TMEM19Q96HH6 336 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 ZNF317Q96PQ6 595 aaPredicted RBP10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 TAPBPLQ9BX59 468 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 ARMC7Q9H6L4 198 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 MANSC1Q9H8J5 431 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 BCL2L10Q9HD36 194 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 ZNF232Q9UNY5 417 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 RASD1Q9Y272 281 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 ATP23Q9Y6H3 246 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 FBN3Q75N90 2809 aa10.9□□□□□ -0.66
SOX2-OT-221ENST00000594942 STAB1Q9NY15 2570 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 TMEM247A6NEH6 219 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 KLF11O14901 512 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 UBDO15205 165 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 CSF3P09919 207 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 BMP2P12643 396 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 BMP4P12644 408 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 PRG2P13727 222 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 HOXB9P17482 250 aaPredicted RBP10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 POLR2JP52435 117 aaKnown RBP10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 EFNA4P52798 201 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 VLDLRP98155 873 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 CHRNB3Q05901 458 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 BNIP2Q12982 314 aa10.89□□□□□ -0.67
SOX2-OT-221ENST00000594942 C3orf36Q3SXR2 165 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms