RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SNRPD2P62316 118 aaKnown RBP14.25□□□□□ -0.13
LIG1-205ENST00000593425 BNIP2Q12982 314 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 MAPK11Q15759 364 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 TBRG1Q3YBR2 411 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 FAM166AQ6J272 317 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 GPAT4Q86UL3 456 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 POMGNT2Q8NAT1 580 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 OR1K1Q8NGR3 316 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 PNPT1Q8TCS8 783 aaKnown RBP14.25□□□□□ -0.13
LIG1-205ENST00000593425 BOD1Q96IK1 185 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 ALKBH3Q96Q83 286 aaPredicted RBP14.25□□□□□ -0.13
LIG1-205ENST00000593425 SLC38A2Q96QD8 506 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 PANX1Q96RD7 426 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 PIMREGQ9BSJ6 248 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 C19orf24Q9BVV8 132 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 SF3B5Q9BWJ5 86 aaKnown RBP14.25□□□□□ -0.13
LIG1-205ENST00000593425 RLIMQ9NVW2 624 aa14.25□□□□□ -0.13
LIG1-205ENST00000593425 SVEP1Q4LDE5 3571 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 LOC100289279A0A1B0GTE1 492 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 CCDC154A6NI56 674 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 NDUFS8O00217 210 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 LGI1O95970 557 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 GSNP06396 782 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 GPIP06744 558 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 GKN3PP0CG01 181 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 APEHP13798 732 aaKnown RBP14.24□□□□□ -0.13
LIG1-205ENST00000593425 IL12AP29459 219 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 THBS2P35442 1172 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 SELENOPP49908 381 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 P2RY4P51582 365 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 MAP2K6P52564 334 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 UFM1P61960 85 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 CARTPTQ16568 116 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 FAM120AOSQ5T036 256 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 C1QTNF12Q5T7M4 302 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 ZNF836Q6ZNA1 936 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 LINGO2Q7L985 606 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 VRK2Q86Y07 508 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 SEC61A2Q9H9S3 476 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 CA10Q9NS85 328 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 ADPRHL2Q9NX46 363 aa14.24□□□□□ -0.13
LIG1-205ENST00000593425 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.24□□□□□ -0.13
LIG1-205ENST00000593425 NR5A2O00482 541 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 FRS3O43559 492 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 DBIP07108 87 aaKnown RBP14.23□□□□□ -0.13
LIG1-205ENST00000593425 NR2F1P10589 423 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 UQCRBP14927 111 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 BGNP21810 368 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 CXCR1P25024 350 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 SERPINF1P36955 418 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 ACAA2P42765 397 aaKnown RBP14.23□□□□□ -0.13
LIG1-205ENST00000593425 SLC1A6P48664 564 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 TUBA1BP68363 451 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 TUBA4AP68366 448 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 ZNF621Q6ZSS3 439 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 TUBA1AQ71U36 451 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 SLC46A3Q7Z3Q1 461 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 SPATA19Q7Z5L4 167 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 LRRC34Q8IZ02 419 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 CADM2Q8N3J6 435 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 AENQ8WTP8 325 aaKnown RBP14.23□□□□□ -0.13
LIG1-205ENST00000593425 FOXN4Q96NZ1 517 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 VRK1Q99986 396 aaPredicted RBP14.23□□□□□ -0.13
LIG1-205ENST00000593425 SOX7Q9BT81 388 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 KATNB1Q9BVA0 655 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 NELFAQ9H3P2 528 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 MTHFD2LQ9H903 347 aaPredicted RBP14.23□□□□□ -0.13
LIG1-205ENST00000593425 MEAF6Q9HAF1 191 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 OBP2BQ9NPH6 170 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 PNPOQ9NVS9 261 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 TMEM45AQ9NWC5 275 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 HAO1Q9UJM8 370 aa14.23□□□□□ -0.13
LIG1-205ENST00000593425 DSPPQ9NZW4 1301 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 LOC390937A0A1W2PQ73 354 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 CDHR4A6H8M9 788 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 ZNF587BE7ETH6 402 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 BIRC5O15392 142 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 UPK3AO75631 287 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 KRT33AO76009 404 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 PGRP06401 933 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 CECR9P0C854 216 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 NAAAQ02083 359 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 GNA13Q14344 377 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 ADIPOQQ15848 244 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 GSTA3Q16772 222 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 OGFOD2Q6N063 350 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 VHLLQ6RSH7 139 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 CREB3L2Q70SY1 520 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 ABHD12BQ7Z5M8 362 aaPredicted RBP14.22□□□□□ -0.13
LIG1-205ENST00000593425 PEX5LQ8IYB4 626 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 TRIML2Q8N7C3 387 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 OR52P1PQ8NH57 321 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 OR52E6Q96RD3 313 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 BPESC1Q9GZL8 116 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 PIF1Q9H611 641 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 SLC6A13Q9NSD5 602 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 AIG1Q9NVV5 245 aa14.22□□□□□ -0.13
LIG1-205ENST00000593425 CRNNQ9UBG3 495 aaPredicted RBP14.22□□□□□ -0.13
LIG1-205ENST00000593425 A0A096LPE4 126 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 A0A1W2PPZ6 126 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms