RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 CDK5R1Q15078 307 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 RHEBQ15382 184 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 P2RY14Q15391 338 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 DHCR24Q15392 516 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 CDKN3Q16667 212 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 GSG1Q2KHT4 349 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 UAP1L1Q3KQV9 507 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 SCGB2B2Q4G0G5 96 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 PLA1AQ53H76 456 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 METRNLQ641Q3 311 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 PAQR6Q6TCH4 344 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 TMPRSS11FQ6ZWK6 438 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 RD3Q7Z3Z2 195 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 ARMC10Q8N2F6 343 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 NLGN4YQ8NFZ3 816 aaPredicted RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 THEM6Q8WUY1 208 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 METTL21AQ8WXB1 218 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 CDS1Q92903 461 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 MIB2Q96AX9 1013 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 LMLNQ96KR4 655 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 URM1Q9BTM9 101 aaKnown RBP3.28□□□□□ -1.89
VMP1-216ENST00000592790 ZDHHC5Q9C0B5 715 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 XKR8Q9H6D3 395 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 ERVMER34-1Q9H9K5 563 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 HRASLSQ9HDD0 168 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 HPF1Q9NWY4 346 aa3.28□□□□□ -1.89
VMP1-216ENST00000592790 SBF1O95248 1867 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TMEM82A0PJX8 343 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 IGLON5A6NGN9 336 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 GGT3PA6NGU5 568 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 A6NIZ1 184 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 PRSS47A8MTI9 375 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ATP6V1G2-DDX39BF2Z307 99 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 F8W036 122 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SOCS6O14544 535 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZNF208O43345 1280 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TGM5O43548 720 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 LATO43561 262 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 GLCEO94923 617 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 GPR75O95800 540 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 B3GALT4O96024 378 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 GP1BBP13224 206 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SNRPBP14678 240 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 FUT1P19526 365 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 CDK2P24941 298 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ITPKBP27987 946 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 CRABP1P29762 137 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 IGFALSP35858 605 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ECI1P42126 302 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ARHGDIBP52566 201 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RAP1BP61224 184 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ERVK-21P61565 698 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RAP1AP62834 184 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 CSNK1G2P78368 415 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 DMWDQ09019 674 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TDGQ13569 410 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SERTAD2Q14140 314 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZNF169Q14929 603 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 TMEM95Q3KNT9 176 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 PLPP4Q5VZY2 271 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 WBP2NLQ6ICG8 309 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 HEPHL1Q6MZM0 1159 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 LEG1Q6P5S2 330 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 PSRC1Q6PGN9 363 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 FCRLAQ7L513 359 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SLC16A9Q7RTY1 509 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RTN4RL1Q86UN2 441 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 TMEM185AQ8NFB2 350 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 GPR32P1Q8NGA4 272 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR6N2Q8NGY6 317 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR5J2Q8NH18 312 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR4K13Q8NH42 304 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR14C36Q8NHC7 312 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 RNF141Q8WVD5 230 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TCTEX1D2Q8WW35 142 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TMEM234Q8WY98 164 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 DIO2Q92813 273 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TCEAL3Q969E4 200 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 MARC2Q969Z3 335 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ARL5BQ96KC2 179 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 C10orf90Q96M02 699 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SORCS2Q96PQ0 1159 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 INTS14Q96SY0 518 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ORAI3Q9BRQ5 295 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SORBS1Q9BX66 1292 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 CCDC86Q9H6F5 360 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 METTL8Q9H825 291 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 PLEKHA1Q9HB21 404 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 DLL4Q9NR61 685 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 COPS7AQ9UBW8 275 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 ZNF107Q9UII5 783 aaPredicted RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 PRELID3BQ9Y3B1 194 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 INSL6Q9Y581 213 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 SLC22A7Q9Y694 548 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 WNT6Q9Y6F9 365 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 NYNRINQ9P2P1 1898 aaKnown RBP3.27□□□□□ -1.89
VMP1-216ENST00000592790 UNC80Q8N2C7 3258 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 TRAV18A0A075B6X5 111 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 A0A0A6YYD5 115 aa3.27□□□□□ -1.89
VMP1-216ENST00000592790 OR5K3A6NET4 321 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms