RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 DNAJC15Q9Y5T4 150 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 CDK5RAP2Q96SN8 1893 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 IGHV5-51A0A0C4DH38 117 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 PRSS44E7EML9 344 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 M0R1B8 84 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 ZNF254O75437 659 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 YES1P07947 543 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 FGF3P11487 239 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-212ENST00000591126 EFNA1P20827 205 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-212ENST00000591126 PRPH2P23942 346 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 MAGEA3P43357 314 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 GSSP48637 474 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 OLIG2Q13516 323 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 OR1Q1Q15612 314 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 BCL2A1Q16548 175 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 LETMD1Q6P1Q0 360 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 MUC20Q8N307 709 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-212ENST00000591126 WNT2BQ93097 391 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 GSTO2Q9H4Y5 243 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 TMEM38AQ9H6F2 299 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 C11orf16Q9NQ32 467 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 OCIAD1Q9NX40 245 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 LPAR3Q9UBY5 353 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 RSL24D1Q9UHA3 163 aaKnown RBP5.78□□□□□ -1.48
SMAD4-212ENST00000591126 DISC1C4P0D8 188 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 PROB1E7EW31 1015 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 PIGAP37287 484 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 ETV6P41212 452 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 MLF1P58340 268 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 B4GALNT1Q00973 533 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 EIF2B1Q14232 305 aaKnown RBP5.78□□□□□ -1.48
SMAD4-212ENST00000591126 GRB7Q14451 532 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 GINS1Q14691 196 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 NRF1Q16656 503 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 CRTC2Q53ET0 693 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-212ENST00000591126 PIGGQ5H8A4 983 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 PERM1Q5SV97 790 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 PGAP1Q75T13 922 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 BNIPLQ7Z465 357 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 BEST3Q8N1M1 668 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 OR13C3Q8NGS6 347 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 FAM46BQ96A09 425 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 BPIFA2Q96DR5 249 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 SYT3Q9BQG1 590 aa5.78□□□□□ -1.48
SMAD4-212ENST00000591126 FAM172BPA6NC97 362 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 PSKH1P11801 424 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 RAB3AP20336 220 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 CTSSP25774 331 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 IL12AP29459 219 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 OR8B8Q15620 311 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 IZUMO2Q6UXV1 221 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SLC35D2Q76EJ3 337 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 GDF7Q7Z4P5 450 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 YRDCQ86U90 279 aaKnown RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SCCPDHQ8NBX0 429 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF417Q8TAU3 575 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 PATE1Q8WXA2 126 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SCARF2Q96GP6 870 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 PLK3Q9H4B4 646 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 EXOSC3Q9NQT5 275 aaKnown RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 A0A1W2PQ09 198 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 IMPA2O14732 288 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 UBBP0CG47 229 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 UBCP0CG48 685 aaKnown RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 HSD17B1P14061 328 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 PGAM2P15259 253 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 ASCL1P50553 236 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SOX8P57073 446 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 PPP1CAP62136 330 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 DUSP8Q13202 625 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 TPBGQ13641 420 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 CEACAM7Q14002 265 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 OTUD1Q5VV17 481 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 CD276Q5ZPR3 534 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 LRFN4Q6PJG9 635 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 KIF2BQ8N4N8 673 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SPICQ8N5J4 248 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 ACBD7Q8N6N7 88 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 CCDC71LQ8N9Z2 235 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 CIB1Q99828 191 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 FAM234AQ9H0X4 552 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 TMEM185BQ9H7F4 350 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 MED11Q9P086 117 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 PILRAQ9UKJ1 303 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 TRAPPC4Q9Y296 219 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 ST8SIA5O15466 376 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 LIFP15018 202 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 HNRNPFP52597 415 aaKnown RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 GYS2P54840 703 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SH3BP2P78314 561 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 PCGF3Q3KNV8 242 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 GXYLT1Q4G148 440 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 Q8IYB0 196 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 OR56B2PQ8NGI1 322 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 CORO2AQ92828 525 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SLC35A4Q96G79 324 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF778Q96MU6 729 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF587Q96SQ5 575 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF442Q9H7R0 627 aa5.77□□□□□ -1.49
SMAD4-212ENST00000591126 SRA1Q9HD15 236 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms