RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 PIK3C3Q8NEB9 887 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 RNF128Q8TEB7 428 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 TMEM255BQ8WV15 326 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 TMEM239Q8WW34 195 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 UTP4Q969X6 686 aaKnown RBP17.11■□□□□ 0.33
DDX39A-214ENST00000590556 ZNF347Q96SE7 839 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 SLC19A3Q9BZV2 496 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 MAN2C1Q9NTJ4 1040 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 AURKCQ9UQB9 309 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 RNF6Q9Y252 685 aa17.11■□□□□ 0.33
DDX39A-214ENST00000590556 NCOA6Q14686 2063 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-214ENST00000590556 CLEC18AA5D8T8 446 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 KPNA4O00629 521 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-214ENST00000590556 PLGP00747 810 aaPredicted RBP17.1■□□□□ 0.33
DDX39A-214ENST00000590556 LDLRP01130 860 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 KLK2P20151 261 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 FUT4P22083 530 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 GTF2E2P29084 291 aaKnown RBP17.1■□□□□ 0.33
DDX39A-214ENST00000590556 SMIM11AP58511 58 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 RNPS1Q15287 305 aaKnown RBP17.1■□□□□ 0.33
DDX39A-214ENST00000590556 PAQR6Q6TCH4 344 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 CLEC18BQ6UXF7 455 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 MRGPRGQ86SM5 289 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 CLEC18CQ8NCF0 446 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 OR6S1Q8NH40 331 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 ASB5Q8WWX0 329 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 SDCCAG3Q96C92 435 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 KLHL4Q9C0H6 718 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 ANKRD19PQ9H560 264 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 GLRX2Q9NS18 164 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 TESMINQ9Y4I5 508 aa17.1■□□□□ 0.33
DDX39A-214ENST00000590556 TCRBV3S1A0A5B6 114 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 FTCDNL1E5RQL4 147 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 CYTIPO60759 359 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 AKR7A3O95154 331 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 BGLAPP02818 100 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 MT-ND1P03886 318 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 CRHP06850 196 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 RAP2AP10114 183 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 HOXB6P17509 224 aaKnown RBP17.09■□□□□ 0.33
DDX39A-214ENST00000590556 CTSSP25774 331 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 CHRNB4P30926 498 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 MAGEA2P43356 314 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 ERFP50548 548 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 UGT2B15P54855 530 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 H3F3AP84243 136 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 RASGEF1BQ0VAM2 473 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 FOXF2Q12947 444 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 MFSD13AQ14CX5 517 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 ZSCAN26Q16670 478 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 OTUD3Q5T2D3 398 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-214ENST00000590556 CCDC103Q8IW40 242 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 TMEM99Q8N816 258 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 PIGXQ8TBF5 258 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 SSC4DQ8WTU2 575 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 ABHD3Q8WU67 409 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 CANT1Q8WVQ1 401 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 GMPPAQ96IJ6 420 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-214ENST00000590556 RSRC1Q96IZ7 334 aaKnown RBP17.09■□□□□ 0.33
DDX39A-214ENST00000590556 C6orf203Q9P0P8 240 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-214ENST00000590556 CLEC4AQ9UMR7 237 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 MED31Q9Y3C7 131 aa17.09■□□□□ 0.33
DDX39A-214ENST00000590556 LRRK2Q5S007 2527 aa17.08■□□□□ 0.33
DDX39A-214ENST00000590556 INTS1Q8N201 2190 aaKnown RBP17.08■□□□□ 0.33
DDX39A-214ENST00000590556 A0A1W2PRQ8 180 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 WIPF3A6NGB9 483 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 ZNF814B7Z6K7 855 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 CH25HO95992 272 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 MT-ATP6P00846 226 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 CBLP22681 906 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 GRPRP30550 384 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 CTBP2P56545 445 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 SPIBQ01892 262 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 LTBQ06643 244 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 DGCR6Q14129 220 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 FGD3Q5JSP0 725 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 ABLIM2Q6H8Q1 611 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 XKRXQ6PP77 449 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 ZNF730Q6ZMV8 503 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 ZNF808Q8N4W9 903 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-214ENST00000590556 CNEP1R1Q8N9A8 125 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 PFN4Q8NHR9 129 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 ITLN2Q8WWU7 325 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-214ENST00000590556 ACOT11Q8WXI4 607 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-214ENST00000590556 DHRS1Q96LJ7 313 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 CHID1Q9BWS9 393 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 ASPNQ9BXN1 380 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 MEPEQ9NQ76 525 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-214ENST00000590556 KLHL9Q9P2J3 617 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 KLHL13Q9P2N7 655 aa17.08■□□□□ 0.32
DDX39A-214ENST00000590556 ZNF629Q9UEG4 869 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-214ENST00000590556 A0A1W2PNV4 684 aa17.07■□□□□ 0.32
DDX39A-214ENST00000590556 AQP7P3A6NL99 342 aa17.07■□□□□ 0.32
DDX39A-214ENST00000590556 ENO4A6NNW6 628 aa17.07■□□□□ 0.32
DDX39A-214ENST00000590556 GADD45GO95257 159 aa17.07■□□□□ 0.32
DDX39A-214ENST00000590556 IL18BPO95998 194 aa17.07■□□□□ 0.32
DDX39A-214ENST00000590556 AGAP20933 346 aa17.07■□□□□ 0.32
DDX39A-214ENST00000590556 OPRM1P35372 400 aa17.07■□□□□ 0.32
DDX39A-214ENST00000590556 SIRPAP78324 504 aa17.07■□□□□ 0.32
DDX39A-214ENST00000590556 ZNF74Q16587 644 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms