RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 DNAJB9Q9UBS3 223 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 GIMAP2Q9UG22 337 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 IKZF3Q9UKT9 509 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CAMK2AQ9UQM7 478 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CCL27Q9Y4X3 112 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 PCDHGB3Q9Y5G1 929 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 COMMD10Q9Y6G5 202 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 IGKV3D-11A0A0A0MRZ8 115 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 IQCF5A8MTL0 148 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 BOLA2-SMG1P6H3BVE0 249 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 H7C0S8 307 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 K7EPI3 171 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 WWP2O00308 870 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 HS3ST1O14792 307 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 TCF21O43680 179 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 LMX1BO60663 402 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 B4GALT2O60909 372 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 AP2A2O94973 939 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 SCELO95171 688 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 VENTXO95231 258 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 FTH1P02794 183 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 LINC00032P0C843 101 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 OCM2P0CE71 109 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 OCMP0CE72 109 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 HOXB9P17482 250 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 TSPAN8P19075 237 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 DPP4P27487 766 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 CMPK1P30085 196 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 IDUAP35475 653 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 PLA2G16P53816 162 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 UFM1P61960 85 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 RPS4XP62701 263 aaKnown RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 HSPA14Q0VDF9 509 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF846Q147U1 533 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 ETFDHQ16134 617 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 BCL2A1Q16548 175 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 PFKFB4Q16877 469 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 RFX4Q33E94 735 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 FAM98BQ52LJ0 330 aaKnown RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 C6orf141Q5SZD1 244 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 FAM219BQ5XKK7 198 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 METTL2BQ6P1Q9 378 aaKnown RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 VWA1Q6PCB0 445 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 AFTPHQ6ULP2 937 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 Q6ZSR9 355 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 TAS2R42Q7RTR8 314 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 IGFN1Q86VF2 1251 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 CALHM3Q86XJ0 350 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 C8orf59Q8N0T1 100 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 SLC15A4Q8N697 577 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 ABHD11Q8NFV4 315 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 OR4L1Q8NH43 312 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 UBTD2Q8WUN7 234 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 NCLNQ969V3 563 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 TMBIM1Q969X1 311 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 RERGQ96A58 199 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 ART5Q96L15 291 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF583Q96ND8 569 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 MUS81Q96NY9 551 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 TNFRSF13CQ96RJ3 184 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 SIGLEC11Q96RL6 698 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 KCNA7Q96RP8 456 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 CGREF1Q99674 301 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 TIMP4Q99727 224 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 WDR12Q9GZL7 423 aaKnown RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 RAD21L1Q9H4I0 556 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 ANKHQ9HCJ1 492 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 MRPS30Q9NP92 439 aaKnown RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 NECTIN3Q9NQS3 549 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 FAM118AQ9NWS6 357 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 TAS2R13Q9NYV9 303 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 NUDT4Q9NZJ9 180 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 NDRG3Q9UGV2 375 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 TAC3Q9UHF0 121 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 PAIP2BQ9ULR5 123 aaKnown RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 MAGED1Q9Y5V3 778 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-209ENST00000589941 HSPE1-MOB4S4R3N1 261 aa6.91□□□□□ -1.3
SMAD4-209ENST00000589941 CD8B2A6NJW9 211 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 TTC36A6NLP5 189 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 A8MXE2 369 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 CLDN25C9JDP6 229 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 F5H697 171 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 KPNA4O00629 521 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-209ENST00000589941 TPST1O60507 370 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 UGT2B11O75310 529 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 MYO1DO94832 1006 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 WDR47O94967 919 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 CLIC3O95833 236 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 FHP07954 510 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 ALOX5P09917 674 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 NCK1P16333 377 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF182P17025 639 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-209ENST00000589941 CNR1P21554 472 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 MAGEA2P43356 314 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 COMPP49747 757 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-209ENST00000589941 GZMMP51124 257 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 PSMD7P51665 324 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF134P52741 427 aa6.9□□□□□ -1.3
SMAD4-209ENST00000589941 CXCR4P61073 352 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms