RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 DSTNP60981 165 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 COPZ1P61923 177 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 KLF10Q13118 480 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 VEZF1Q14119 521 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 LARS2Q15031 903 aaKnown RBP12.64□□□□□ -0.39
MBD1-220ENST00000589758 RNF220Q5VTB9 566 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 AGAP6Q5VW22 663 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 WBP2NLQ6ICG8 309 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 SPATA21Q7Z572 469 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 CPLX4Q7Z7G2 160 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 DTX2Q86UW9 622 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 MSRB3Q8IXL7 192 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 DEPDC4Q8N2C3 294 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 OR52N5Q8NH56 324 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
MBD1-220ENST00000589758 NSRP1Q9H0G5 558 aaKnown RBP12.64□□□□□ -0.39
MBD1-220ENST00000589758 PIF1Q9H611 641 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 BARX1Q9HBU1 254 aaPredicted RBP12.64□□□□□ -0.39
MBD1-220ENST00000589758 VAPAQ9P0L0 249 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 ZNF232Q9UNY5 417 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 FLVCR1Q9Y5Y0 555 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 SLC25A15Q9Y619 301 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 USF3Q68DE3 2245 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 DNHD1Q96M86 4753 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 A0A0G2JPF8 293 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 GMNCA6NCL1 334 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 HNRNPCL2B2RXH8 293 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 HNRNPCL3B7ZW38 293 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 HNRNPCL1O60812 293 aaKnown RBP12.63□□□□□ -0.39
MBD1-220ENST00000589758 BCHEP06276 602 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 GPIP06744 558 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 THBS1P07996 1170 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 TFPTP0C1Z6 253 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 GKN3PP0CG01 181 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 HNRNPCL4P0DMR1 293 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 HOXB9P17482 250 aaPredicted RBP12.63□□□□□ -0.39
MBD1-220ENST00000589758 PCSK6P29122 969 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 NFYCQ13952 458 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 SLC17A1Q14916 467 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 RGNQ15493 299 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 MAPK11Q15759 364 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 GABRA6Q16445 453 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 NRF1Q16656 503 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 OTUD3Q5T2D3 398 aaPredicted RBP12.63□□□□□ -0.39
MBD1-220ENST00000589758 LRIF1Q5T3J3 769 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 SLC22A25Q6T423 547 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 ZNF836Q6ZNA1 936 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 DHDDSQ86SQ9 333 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 RETREG3Q86VR2 466 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 VRK2Q86Y07 508 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
MBD1-220ENST00000589758 C17orf78Q8N4C9 275 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 C1orf162Q8NEQ5 155 aaPredicted RBP12.63□□□□□ -0.39
MBD1-220ENST00000589758 SLC38A5Q8WUX1 472 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 TMEM45BQ96B21 275 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 HS6ST2Q96MM7 605 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 AMBRA1Q9C0C7 1298 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 SLCO5A1Q9H2Y9 848 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 RAD21L1Q9H4I0 556 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 RLIMQ9NVW2 624 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 ARMCX1Q9P291 453 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 ZNF443Q9Y2A4 671 aaPredicted RBP12.63□□□□□ -0.39
MBD1-220ENST00000589758 AMDHD2Q9Y303 409 aa12.63□□□□□ -0.39
MBD1-220ENST00000589758 LOC100653049A0A140TA62 436 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
MBD1-220ENST00000589758 LIPT2A6NK58 231 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 PDLIM1O00151 329 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 KRT34O76011 436 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 CD8AP01732 235 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 ITGA5P08648 1049 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 NUDT7P0C024 238 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 DRD4P21917 467 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 CD40P25942 277 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 ACAA2P42765 397 aaKnown RBP12.62□□□□□ -0.39
MBD1-220ENST00000589758 ZNF83P51522 516 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 MMEL1Q495T6 779 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 DLEU7Q6UYE1 221 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 SNX32Q86XE0 403 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 POMGNT2Q8NAT1 580 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 OR52E4Q8NGH9 312 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 ADAD1Q96M93 576 aaKnown RBP12.62□□□□□ -0.39
MBD1-220ENST00000589758 DHRS9Q9BPW9 319 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 SPATA9Q9BWV2 254 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 TAPBPLQ9BX59 468 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 POU2F3Q9UKI9 436 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 IFT52Q9Y366 437 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 CAPN7Q9Y6W3 813 aa12.62□□□□□ -0.39
MBD1-220ENST00000589758 NIPBLQ6KC79 2804 aaeCLIP12.61□□□□□ -0.39
MBD1-220ENST00000589758 AQP7P3A6NL99 342 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 A8MVM7 634 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 EVPLLA8MZ36 301 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 INAFM1C9JVW0 142 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 M0R1B8 84 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 FBP2O00757 339 aa12.61□□□□□ -0.39
MBD1-220ENST00000589758 AKR7A3O95154 331 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms